RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 HADHAP40939 763 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 NBL1P41271 181 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 PI4KAP42356 2102 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 DPP6P42658 865 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 C21orf59P57076 290 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 RACK1P63244 317 aaKnown RBP14.91□□□□□ -0.02
NUP54-213ENST00000513352 CAV1Q03135 178 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 MSLNQ13421 630 aaPredicted RBP14.91□□□□□ -0.02
NUP54-213ENST00000513352 INPP5AQ14642 412 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 TEAD4Q15561 434 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 TRADDQ15628 312 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 SKIDA1Q1XH10 827 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 FNBP1LQ5T0N5 605 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 TSTD2Q5T7W7 516 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 ZDHHC20Q5W0Z9 365 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 GCNT7Q6ZNI0 430 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 ZNF765Q7L2R6 523 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 CCDC25Q86WR0 208 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 CBARPQ8N350 705 aaPredicted RBP14.91□□□□□ -0.02
NUP54-213ENST00000513352 PLA2G15Q8NCC3 412 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 GPR26Q8NDV2 337 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 CENPTQ96BT3 561 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 LOXL4Q96JB6 756 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 RANBP9Q96S59 729 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 KLF6Q99612 283 aaPredicted RBP14.91□□□□□ -0.02
NUP54-213ENST00000513352 ORAI3Q9BRQ5 295 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 NCDNQ9UBB6 729 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 PILRBQ9UKJ0 227 aa14.91□□□□□ -0.02
NUP54-213ENST00000513352 GLYATL1P3A0A0U1RQE8 302 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 A0A1B0GTW7 788 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 RGSL1A5PLK6 1076 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 POM121BA6NF01 834 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 PRR5-ARHGAP8B1AHC4 643 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 C10orf142B7Z368 130 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 K7ESM1 405 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 INPP4BO15327 924 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 PPFIA2O75334 1257 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 LMNAP02545 664 aaKnown RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 TSHRP16473 764 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 CD38P28907 300 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 MPLP40238 635 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 AFF3P51826 1226 aaKnown RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 DCDC1P59894 354 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 AGERQ15109 404 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 HP1BP3Q5SSJ5 553 aaPredicted RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 ESRP1Q6NXG1 681 aaKnown RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 PNCKQ6P2M8 343 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 RABEPKQ7Z6M1 372 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 PELI3Q8N2H9 469 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 TMEM145Q8NBT3 493 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 OR13H1Q8NG92 308 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 FBXO25Q8TCJ0 367 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 ART4Q93070 314 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 STAMBPL1Q96FJ0 436 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 KLHDC7BQ96G42 594 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 CDH19Q9H159 772 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 WDR26Q9H7D7 661 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 CHRAC1Q9NRG0 131 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 TMEM74BQ9NUR3 256 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 NLE1Q9NVX2 485 aaPredicted RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 SLC2A6Q9UGQ3 507 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 OR1A2Q9Y585 309 aa14.9□□□□□ -0.02
NUP54-213ENST00000513352 TP53BP1Q12888 1972 aaPredicted RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 ZNF106Q9H2Y7 1883 aaKnown RBP14.9□□□□□ -0.02
NUP54-213ENST00000513352 MROH6A6NGR9 719 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 THEGLP0DJG4 465 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 MAGEA3P43357 314 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 CSNK1EP49674 416 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 THOP1P52888 689 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 DRG2P55039 364 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 PRAMEP78395 509 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 DPTQ07507 201 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 PDIA2Q13087 525 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 SMAD1Q15797 465 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 CHRNA6Q15825 494 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 DUOXA1Q1HG43 343 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 MSS51Q4VC12 460 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 ZRANB3Q5FWF4 1079 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 HENMT1Q5T8I9 393 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 KYAT3Q6YP21 454 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 Q6ZSR6 202 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 CENPUQ71F23 418 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 NLRP9Q7RTR0 991 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 HEATR4Q86WZ0 1026 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 ANKMY2Q8IV38 441 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 IFT20Q8IY31 132 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 RAVER1Q8IY67 606 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 SUMF1Q8NBK3 374 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 GDAP1Q8TB36 358 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 PTCD2Q8WV60 388 aaKnown RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
NUP54-213ENST00000513352 CFAP36Q96G28 342 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 BMFQ96LC9 184 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 ZNF778Q96MU6 729 aa14.89□□□□□ -0.03
NUP54-213ENST00000513352 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms