RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 LGR4Q9BXB1 951 aa21.26■□□□□ 0.99
UBE2D3-229ENST00000510129 ZFYVE1Q9HBF4 777 aa21.26■□□□□ 0.99
UBE2D3-229ENST00000510129 CYP4F12Q9HCS2 524 aa21.26■□□□□ 0.99
UBE2D3-229ENST00000510129 TRNAU1APQ9NX07 287 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-229ENST00000510129 LRP4O75096 1905 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 LY6G6EA0A0G2JKS1 128 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 ACACBO00763 2458 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 OPA1O60313 960 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 IVLP07476 585 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 SPINT3P49223 89 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 INSM1Q01101 510 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 ILF3Q12906 894 aaKnown RBP eCLIP21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 PCSK7Q16549 785 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 CDKN3Q16667 212 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 ZCCHC14Q8WYQ9 949 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 GRAMD1AQ96CP6 724 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 GSDMCQ9BYG8 508 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 FRMD8Q9BZ67 464 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 FAM83DQ9H4H8 585 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 CCDC86Q9H6F5 360 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 DKK4Q9UBT3 224 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 MOSPD1Q9UJG1 213 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 GPR34Q9UPC5 381 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 SLC17A4Q9Y2C5 497 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 U3KQA8 63 aa21.25■□□□□ 0.99
UBE2D3-229ENST00000510129 MPP3Q13368 585 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 GALNT3Q14435 633 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 TAF8Q7Z7C8 310 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 DCBLD1Q8N8Z6 715 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 ACTL9Q8TC94 416 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 MAPK15Q8TD08 544 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 ALG3Q92685 438 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 LRRC45Q96CN5 670 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 NXPE2Q96DL1 559 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 DEPDC7Q96QD5 511 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 NRSN2Q9GZP1 204 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 TRABDQ9H4I3 376 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 CARS2Q9HA77 564 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 HACD3Q9P035 362 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 RSPH14Q9UHP6 348 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 CD84Q9UIB8 345 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 PADI4Q9UM07 663 aa21.24■□□□□ 0.99
UBE2D3-229ENST00000510129 CPED1A4D0V7 1026 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PMPCBO75439 489 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 ANXA9O76027 345 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 MT-CYBP00156 380 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 CEACAM5P06731 702 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PYGMP11217 842 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 NFKB1P19838 968 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 DCDC1P59894 354 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 OTUD4Q01804 1114 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PTPRRQ15256 657 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 ZDHHC20Q5W0Z9 365 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PDPK2PQ6A1A2 396 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 EFL1Q7Z2Z2 1120 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 SLC35F3Q8IY50 421 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 ZNF567Q8N184 647 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PELI3Q8N2H9 469 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 SPATA22Q8NHS9 363 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 SCAMP4Q969E2 229 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 RIOK2Q9BVS4 552 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 MRPL40Q9NQ50 206 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 VPS18Q9P253 973 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 NFKBIL1Q9UBC1 381 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 ADGRG1Q9Y653 693 aa21.23■□□□□ 0.99
UBE2D3-229ENST00000510129 PLXNB3Q9ULL4 1909 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 LOC285095A0A1B0GVY8 99 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 FAM149AA5PLN7 773 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 TCEA3O75764 348 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 MT-CO3P00414 261 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 SOD1P00441 154 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 RBP3P10745 1247 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 HLA-DPA1P20036 260 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 EIF3EP60228 445 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 TARDBPQ13148 414 aaKnown RBP eCLIP21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 CAMK2BQ13554 666 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 LRP8Q14114 963 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 HENMT1Q5T8I9 393 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 B4GALNT4Q76KP1 1039 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 LYSMD3Q7Z3D4 306 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 KDELC2Q7Z4H8 507 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 TMC3Q7Z5M5 1100 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 FAM46DQ8NEK8 389 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 GPBAR1Q8TDU6 330 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 SCARF2Q96GP6 870 aaPredicted RBP21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 ZSCAN5AQ9BUG6 496 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 FSD1LQ9BXM9 530 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 GPR63Q9BZJ6 419 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 TMEM168Q9H0V1 697 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 RMI1Q9H9A7 625 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 GULP1Q9UBP9 304 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 AAR2Q9Y312 384 aaKnown RBP21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 ZNF711Q9Y462 761 aa21.22■□□□□ 0.99
UBE2D3-229ENST00000510129 TRABD2BA6NFA1 517 aa21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 ZW10O43264 779 aa21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 CELA2BP08218 269 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 CCDC175P0C221 793 aa21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 RBL1P28749 1068 aa21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 CD68P34810 354 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-229ENST00000510129 GEMP55040 296 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms