RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 KCTD14Q9BQ13 255 aaPredicted RBP17.73■□□□□ 0.43
NUP54-205ENST00000507257 HEPHQ9BQS7 1158 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 FICDQ9BVA6 458 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 LHPPQ9H008 270 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 SLC2A6Q9UGQ3 507 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 GIT1Q9Y2X7 761 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 PCDHGA11Q9Y5H2 935 aa17.73■□□□□ 0.43
NUP54-205ENST00000507257 GRXCR2A6NFK2 248 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 TULP3O75386 442 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 CXCR3P49682 368 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 NDUFV1P49821 464 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 ARSFP54793 590 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 MLLT10P55197 1068 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 EPS8Q12929 822 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 AGAP7PQ5VUJ5 663 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 SLC27A1Q6PCB7 646 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 RANBP10Q6VN20 620 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 PRR23BQ6ZRT6 265 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 CLEC20AQ6ZU45 233 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 THAP5Q7Z6K1 395 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 RIMKLAQ8IXN7 391 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 CSF3RQ99062 836 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 TUT1Q9H6E5 874 aaKnown RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 AKIP1Q9NQ31 210 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 CNGB3Q9NQW8 809 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 AZIN1O14977 448 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 SPTLC1O15269 473 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 EEDO75530 441 aaKnown RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 LRIG2O94898 1065 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 PAPSS2O95340 614 aaPredicted RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 TAF6P49848 677 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 PLK1P53350 603 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 OCA2Q04671 838 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 LIPEQ05469 1076 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 DAG1Q14118 895 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 RCAN2Q14206 197 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 CAPRIN1Q14444 709 aaKnown RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 SV2CQ496J9 727 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 HECTD2Q5U5R9 776 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 ZNF280DQ6N043 979 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 PAQR9Q6ZVX9 377 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 RPS27LQ71UM5 84 aaKnown RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 SPATA19Q7Z5L4 167 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 ISCA2Q86U28 154 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 TOP6BLQ8N6T0 577 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 IPMKQ8NFU5 416 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 TWIST2Q8WVJ9 160 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 AURKBQ96GD4 344 aaPredicted RBP17.72■□□□□ 0.43
NUP54-205ENST00000507257 MUS81Q96NY9 551 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 COLEC11Q9BWP8 271 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 IL1RL2Q9HB29 575 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 ARNT2Q9HBZ2 717 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 ENPP5Q9UJA9 477 aa17.72■□□□□ 0.43
NUP54-205ENST00000507257 DNAJC25-GNG10A0A024R161 153 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 SYNCRIPO60506 623 aaKnown RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 CDK14O94921 469 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 SLC25A27O95847 323 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 LGALS2P05162 132 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 CDH1P12830 882 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 EEF1B2P24534 225 aaKnown RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 CYP2C18P33260 490 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 IDUAP35475 653 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 OPRL1P41146 370 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 YAP1P46937 504 aaKnown RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 IREB2P48200 963 aaKnown RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 PLA2G16P53816 162 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 TOP3AQ13472 1001 aaPredicted RBP17.71■□□□□ 0.43
NUP54-205ENST00000507257 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 PLCL1Q15111 1095 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 CCDC80Q76M96 950 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 ANKRD13BQ86YJ7 626 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 SPARTQ8N0X7 666 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 PIK3C3Q8NEB9 887 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 CASP10Q92851 521 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 COPS5Q92905 334 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 PPP1R16BQ96T49 567 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 YIPF2Q9BWQ6 316 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 OR12D3Q9UGF7 316 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 DAPK2Q9UIK4 370 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 NAALAD2Q9Y3Q0 740 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 GPR45Q9Y5Y3 372 aa17.71■□□□□ 0.43
NUP54-205ENST00000507257 AURKAO14965 403 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 HUS1O60921 280 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 DEAF1O75398 565 aaPredicted RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 BEST1O76090 585 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 ALPLP05186 524 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 PRR35P0CG20 571 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 TXNP10599 105 aaKnown RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 HOXB8P17481 243 aaPredicted RBP17.7■□□□□ 0.42
NUP54-205ENST00000507257 HTR7P34969 479 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 SH3BP2P78314 561 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 TRIM32Q13049 653 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 BFSP2Q13515 415 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 KCTD2Q14681 263 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.42
NUP54-205ENST00000507257 DEPDC1Q5TB30 811 aa17.7■□□□□ 0.42
NUP54-205ENST00000507257 TTC23Q5W5X9 447 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms