RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LRRC66Q68CR7 880 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 LIPIQ6XZB0 460 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 USP30Q70CQ3 517 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ZNF765Q7L2R6 523 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PARS2Q7L3T8 475 aaKnown RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 RASSF3Q86WH2 238 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ACMSDQ8TDX5 336 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ALKBH8Q96BT7 664 aaKnown RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 FAM122AQ96E09 287 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 RBBP8Q99708 897 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 DYRK4Q9NR20 520 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 ARHGEF3Q9NR81 526 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 INTS10Q9NVR2 710 aaKnown RBP12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PKD2L2Q9NZM6 624 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 FADS3Q9Y5Q0 445 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 PSAT1Q9Y617 370 aa12.72□□□□□ -0.37
TRAF4-208ENST00000469529 KANSL1LA0AUZ9 987 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 GAPDHSO14556 408 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SPINT1O43278 529 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 UGT1A9O60656 530 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 RNF40O75150 1001 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 HOXB2P14652 356 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 DRD3P35462 400 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SPAM1P38567 509 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 PLA2G5P39877 138 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 P2RY2P41231 377 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 MAGEA12P43365 314 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 TTPAP49638 278 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SLC18A2Q05940 514 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.371e-13■■■■■ 42.9
TRAF4-208ENST00000469529 PTPRRQ15256 657 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 AARS2Q5JTZ9 985 aaKnown RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 PIP5KL1Q5T9C9 394 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 LYPLAL1Q5VWZ2 237 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SYT13Q7L8C5 426 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SNX20Q7Z614 316 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 CCDC91Q7Z6B0 441 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 PTAR1Q7Z6K3 402 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 ZC3HC1Q86WB0 502 aaKnown RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 TMPRSS6Q8IU80 811 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 KRT222Q8N1A0 295 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 COQ10AQ96MF6 247 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 GPR22Q99680 433 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 MKRN2Q9H000 416 aaKnown RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 SUDS3Q9H7L9 328 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 CATSPERZQ9NTU4 200 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 POLR3BQ9NW08 1133 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 FKBPLQ9UIM3 349 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 FZD4Q9ULV1 537 aa12.71□□□□□ -0.37
TRAF4-208ENST00000469529 NOVA2Q9UNW9 492 aaKnown RBP12.71□□□□□ -0.37
TRAF4-208ENST00000469529 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 C10orf142B7Z368 130 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 RFPL1O75677 317 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 PIAS1O75925 651 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
TRAF4-208ENST00000469529 ITGA2BP08514 1039 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 C1SP09871 688 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 MC4RP32245 332 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 PTGER3P43115 390 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 CD151P48509 253 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 DGKEP52429 567 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 SEC13P55735 322 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 DPTQ07507 201 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 CNTN1Q12860 1018 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 CTBP1Q13363 440 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 CRY1Q16526 586 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 ZNF470Q6ECI4 717 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 KIAA1211LQ6NV74 962 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 DENND6AQ8IWF6 608 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 AADATQ8N5Z0 425 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 GPR26Q8NDV2 337 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 ASB12Q8WXK4 309 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 TTC1Q99614 292 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 KCNH6Q9H252 994 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 FAM83DQ9H4H8 585 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 LMAN1LQ9HAT1 526 aa12.7□□□□□ -0.38
TRAF4-208ENST00000469529 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms