RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 QPCTQ16769 361 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 FAM182AQ5T1J6 154 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 CERCAMQ5T4B2 595 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SPOCD1Q6ZMY3 1216 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 NRSN1Q8IZ57 195 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 OR6C4Q8NGE1 309 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 FGF11Q92914 225 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 GRAMD1AQ96CP6 724 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 IMP4Q96G21 291 aaKnown RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 ATXN7L3BQ96GX2 97 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 AGAP3Q96P47 875 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 PANX2Q96RD6 677 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 POLR1BQ9H9Y6 1135 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 TRNAU1APQ9NX07 287 aaKnown RBP18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SEPT10Q9P0V9 454 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SUFUQ9UMX1 484 aa18.85■□□□□ 0.61
COL5A1-203ENST00000460264 SCN8AQ9UQD0 1980 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 UNC13CQ8NB66 2214 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 C1orf232A0A0U1RR37 186 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 A0A1W2PNU3 283 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 IVLP07476 585 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 FECHP22830 423 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 CYLC1P35663 651 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 GNPDA1P46926 289 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 LSSP48449 732 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 POLD2P49005 469 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 MARCKSL1P49006 195 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 NR2C2P49116 596 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 ILF3Q12906 894 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 TFDP2Q14188 446 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 PRKD1Q15139 912 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 C14orf28Q4W4Y0 310 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 C3orf38Q5JPI3 329 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 C11orf63Q6NUN7 778 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 DOK6Q6PKX4 331 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 B4GALNT4Q76KP1 1039 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 NLRP8Q86W28 1048 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 NRROSQ86YC3 692 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 RAVER1Q8IY67 606 aaKnown RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 TRIB3Q96RU7 358 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 AGAP2Q99490 1192 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 MLPHQ9BV36 600 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 RIOK2Q9BVS4 552 aaKnown RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 ADGRE3Q9BY15 652 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 GSDMCQ9BYG8 508 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 DPEP2Q9H4A9 486 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 LUC7LQ9NQ29 371 aaKnown RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 SAE1Q9UBE0 346 aaPredicted RBP18.84■□□□□ 0.61
COL5A1-203ENST00000460264 SATB2Q9UPW6 733 aa18.84■□□□□ 0.61
COL5A1-203ENST00000460264 CACNA1GO43497 2377 aa18.83■□□□□ 0.61
COL5A1-203ENST00000460264 ANKRD66B4E2M5 251 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 CST8O60676 142 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 RPLP0P05388 317 aaKnown RBP18.83■□□□□ 0.6
COL5A1-203ENST00000460264 PYGLP06737 847 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 GLB1P16278 677 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 PECAM1P16284 738 aaPredicted RBP18.83■□□□□ 0.6
COL5A1-203ENST00000460264 CCL7P80098 99 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 GALNT3Q14435 633 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 HLTFQ14527 1009 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL5A1-203ENST00000460264 LLGL1Q15334 1064 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 KAZNQ674X7 775 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 PDZD3Q86UT5 571 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 NT5DC3Q86UY8 548 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 KATNAL2Q8IYT4 538 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 LSMEM2Q8N112 164 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 KIAA1524Q8TCG1 905 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 TADA1Q96BN2 335 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 SCARF2Q96GP6 870 aaPredicted RBP18.83■□□□□ 0.6
COL5A1-203ENST00000460264 HIC2Q96JB3 615 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 SLC25A51Q9H1U9 297 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 ASCL3Q9NQ33 180 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 SPATS2LQ9NUQ6 558 aaKnown RBP18.83■□□□□ 0.6
COL5A1-203ENST00000460264 APPL1Q9UKG1 709 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 ST14Q9Y5Y6 855 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 PTPRQQ9UMZ3 2332 aa18.83■□□□□ 0.6
COL5A1-203ENST00000460264 A0A1W2PQM1 296 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 SOWAHDA6NJG2 315 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 D6RAR5 112 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 RRP8O43159 456 aaKnown RBP18.82■□□□□ 0.6
COL5A1-203ENST00000460264 NDUFA10O95299 355 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 PTPN3P26045 913 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 AK4P27144 223 aaPredicted RBP18.82■□□□□ 0.6
COL5A1-203ENST00000460264 ABCG1P45844 678 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 SPINT3P49223 89 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 ADCY2Q08462 1091 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 SLC14A2Q15849 920 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 IGF2-ASQ6U949 168 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 CCNJLQ8IV13 435 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 COX14Q96I36 57 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 ZNF578Q96N58 590 aaPredicted RBP18.82■□□□□ 0.6
COL5A1-203ENST00000460264 GFM1Q96RP9 751 aaKnown RBP18.82■□□□□ 0.6
COL5A1-203ENST00000460264 WDR24Q96S15 920 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 CDH19Q9H159 772 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 TAAR2Q9P1P5 351 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 TMEM98Q9Y2Y6 226 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 RNF215Q9Y6U7 377 aa18.82■□□□□ 0.6
COL5A1-203ENST00000460264 hCG_1818297A0A087WSY0 165 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms