RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GLOD4Q9HC38 313 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 SIRPGQ9P1W8 387 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 LY6G6EA0A0G2JKS1 128 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 EME2A4GXA9 379 aaPredicted RBP11.17□□□□□ -0.62
RFFL-204ENST00000414419 PMPCBO75439 489 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 TJP3O95049 919 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 MT-CYBP00156 380 aaPredicted RBP11.17□□□□□ -0.62
RFFL-204ENST00000414419 MT-CO3P00414 261 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 STC1P52823 247 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 ADCY2Q08462 1091 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 ILF3Q12906 894 aaKnown RBP eCLIP11.17□□□□□ -0.627e-7■■□□□ 13.2
RFFL-204ENST00000414419 XRCC4Q13426 336 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 PEX6Q13608 980 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 SLC14A2Q15849 920 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 FAM182AQ5T1J6 154 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 DOK6Q6PKX4 331 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 BBS12Q6ZW61 710 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 PEX26Q7Z412 305 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 TMEM139Q8IV31 216 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 SLC35F3Q8IY50 421 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 UBL4BQ8N7F7 174 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 FAM46DQ8NEK8 389 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 OR6C4Q8NGE1 309 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 HTR3CQ8WXA8 447 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 SCAMP4Q969E2 229 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 NXPE2Q96DL1 559 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 DEPDC7Q96QD5 511 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 SRPK1Q96SB4 655 aaKnown RBP11.17□□□□□ -0.62
RFFL-204ENST00000414419 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 RIOK2Q9BVS4 552 aaKnown RBP11.17□□□□□ -0.62
RFFL-204ENST00000414419 GSDMCQ9BYG8 508 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 OSBPL8Q9BZF1 889 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 TMEM168Q9H0V1 697 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 FAM83DQ9H4H8 585 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 ZFYVE1Q9HBF4 777 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 FAM153AQ9UHL3 310 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 AK5Q9Y6K8 562 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 U3KQA8 63 aa11.17□□□□□ -0.62
RFFL-204ENST00000414419 USP24Q9UPU5 2620 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 GRID2IPA4D2P6 1211 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 RGSL1A5PLK6 1076 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 GOLGA6L9A6NEM1 432 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
RFFL-204ENST00000414419 ASMTLO95671 621 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 NDST3O95803 873 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 CEACAM5P06731 702 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 GNPDA1P46926 289 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 SPINT3P49223 89 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 CYP4F3Q08477 520 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 ADAMTSL4Q6UY14 1074 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 RFLNAQ6ZTI6 216 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 LYSMD3Q7Z3D4 306 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 SPATA22Q8NHS9 363 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 WDR48Q8TAF3 677 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 QKIQ96PU8 341 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■□□ 18.5
RFFL-204ENST00000414419 GPR63Q9BZJ6 419 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 TSGA10Q9BZW7 698 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 SYNDIG1Q9H7V2 258 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 MAGEE1Q9HCI5 957 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 RAD18Q9NS91 495 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 TRHDEQ9UKU6 1024 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 SUFUQ9UMX1 484 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
RFFL-204ENST00000414419 URB1O60287 2271 aaKnown RBP11.16□□□□□ -0.62
RFFL-204ENST00000414419 MIF4GDA9UHW6 222 aaKnown RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 INPP4BO15327 924 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 SLC4A1P02730 911 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 PIRTP0C851 137 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 NFKB1P19838 968 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 PTPN7P35236 360 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 POLD2P49005 469 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 BIRC2Q13490 618 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 NOMO1Q15155 1222 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 KCTD16Q68DU8 428 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 ITPRIPL1Q6GPH6 555 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 DARS2Q6PI48 645 aaKnown RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 PROSER1Q86XN7 944 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
RFFL-204ENST00000414419 ZNF567Q8N184 647 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 DCBLD1Q8N8Z6 715 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 KYQ8NBH2 561 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 FCRL5Q96RD9 977 aa11.15□□□□□ -0.62
RFFL-204ENST00000414419 TRIB3Q96RU7 358 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms