RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GOLGA8DPQ0D2H9 430 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 SREBF2Q12772 1141 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 FRG1Q14331 258 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 WTAPQ15007 396 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PPP2R5BQ15173 497 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 DPCR1Q3MIW9 517 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 RILPL1Q5EBL4 403 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PAPD7Q5XG87 772 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 KDELC2Q7Z4H8 507 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 SERPINA11Q86U17 422 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 SLC25A41Q8N5S1 370 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PI4KAP1Q8N8J0 262 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 LRRC57Q8N9N7 239 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 CD99L2Q8TCZ2 262 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 SCFD2Q8WU76 684 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ARHGEF2Q92974 986 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 GTF3C6Q969F1 213 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ERP27Q96DN0 273 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 FAM120BQ96EK7 910 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 WDFY2Q96P53 400 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 MAP7D2Q96T17 732 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 STRA6Q9BX79 667 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 COA1Q9GZY4 146 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 POLR1BQ9H9Y6 1135 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 PNRC2Q9NPJ4 139 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 POLG2Q9UHN1 485 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 AGO2Q9UKV8 859 aaKnown RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ZNF215Q9UL58 517 aaPredicted RBP5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 RAP2CQ9Y3L5 183 aa5.83□□□□□ -1.48
RNU4-39P-201ENST00000362455 ZNF804BA4D1E1 1349 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TRBV5-3A0A0A0MS03 114 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 A0A1W2PQF6 199 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 hCG_1807616A0A1W2PRN6 198 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CLRN2A0PK11 232 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 WIPF3A6NGB9 483 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TAF4O00268 1085 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 EBAG9O00559 213 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PPP6CO00743 305 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TP73O15350 636 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 BCAT2O15382 392 aaPredicted RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PRPF4O43172 522 aaKnown RBP eCLIP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 HNRNPCL1O60812 293 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TMCC2O75069 709 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 SLPIP03973 132 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CTSAP10619 480 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PORP16435 677 aaPredicted RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CTPS1P17812 591 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CDH2P19022 906 aaPredicted RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 RYKP34925 604 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PTGER1P34995 402 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 HDAC4P56524 1084 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 NHLH1Q02575 133 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ACVR2BQ13705 512 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 RUNX2Q13950 521 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 HIST2H2ACQ16777 129 aaPredicted RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ALG11Q2TAA5 492 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 KIAA1614Q5VZ46 1190 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ZNF793Q6ZN11 406 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ENOSF1Q7L5Y1 443 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ARMC9Q7Z3E5 817 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 RD3Q7Z3Z2 195 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 SZRD1Q7Z422 152 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TBC1D26Q86UD7 250 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TDRPQ86YL5 185 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 LURAP1LQ8IV03 231 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 DHX40Q8IX18 779 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 FAM185AQ8N0U4 392 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 NEK9Q8TD19 979 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 SNRNP27Q8WVK2 155 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PSPC1Q8WXF1 523 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 PABPC5Q96DU9 382 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 ZNF333Q96JL9 665 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 BBS4Q96RK4 519 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 TUBB6Q9BUF5 446 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 FBRSL1Q9HCM7 1045 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CD209Q9NNX6 404 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 RNF146Q9NTX7 359 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 HAO1Q9UJM8 370 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 CARD8Q9Y2G2 431 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 LAMB2P55268 1798 aa5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 DDX60Q8IY21 1712 aaKnown RBP5.82□□□□□ -1.48
RNU4-39P-201ENST00000362455 MYO3BQ8WXR4 1341 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 ANKRD36CQ5JPF3 1778 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 PAPPA2Q9BXP8 1791 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 A0A096LPK6 155 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 SMIM35A0A1B0GVV1 85 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 C17orf102A2RUQ5 167 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 USP17L23D6RBM5 183 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 NPIPB11E5RHQ5 1161 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 GJB3O75712 270 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 TOP3BO95985 862 aaKnown RBP5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 TFP02787 698 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 BMP5P22003 454 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 CERS1P27544 350 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 NF2P35240 595 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 ARHGAP25P42331 645 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 GABRB2P47870 512 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 INHBEP58166 350 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 SMTNL2Q2TAL5 461 aa5.81□□□□□ -1.48
RNU4-39P-201ENST00000362455 DUSP28Q4G0W2 176 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms