RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PSMB7Q99436 277 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 TRIM56Q9BRZ2 755 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 CEP44Q9C0F1 390 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 EPB41L1Q9H4G0 881 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 NEUROD4Q9HD90 331 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 WASH6PQ9NQA3 447 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 COQ3Q9NZJ6 369 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 SLC12A6Q9UHW9 1150 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 MEMO1Q9Y316 297 aa8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 ANK3Q12955 4377 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-205ENST00000350435 PCM1Q15154 2024 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NUP210LQ5VU65 1888 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 TULP2O00295 520 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 PEX12O00623 359 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CUTAO60888 179 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CTAG2O75638 210 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 LTFP02788 710 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 RAF1P04049 648 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 RHOCP08134 193 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 HOXC4P09017 264 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 LCP1P13796 627 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 ITIH2P19823 946 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 GKP32189 559 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 OTX2P32243 289 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 ACTR1BP42025 376 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 GNPDA1P46926 289 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 GFERP55789 205 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 ACTR1AP61163 376 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NKX6-1P78426 367 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CTBSQ01459 385 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 ELP6Q0PNE2 266 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CBLBQ13191 982 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NFATC2Q13469 925 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 KEAP1Q14145 624 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 SYCP1Q15431 976 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 PDLIM3Q53GG5 364 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 SPOPLQ6IQ16 392 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NCCRP1Q6ZVX7 275 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 MTERF4Q7Z6M4 381 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 SCML4Q8N228 414 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CIARTQ8N365 385 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 DCAF4L2Q8NA75 395 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 OR6K2Q8NGY2 324 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 DQX1Q8TE96 717 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 OSBPL1AQ9BXW6 950 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NLNQ9BYT8 704 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 PLA2G12AQ9BZM1 189 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CHST8Q9H2A9 424 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 CLEC4MQ9H2X3 399 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 EPS8L2Q9H6S3 715 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 OLFML3Q9NRN5 406 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 LRFN1Q9P244 771 aa8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-205ENST00000350435 NBEAL2Q6ZNJ1 2754 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 CCDC88CQ9P219 2028 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 CCDC78A2IDD5 438 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 KCNU1A8MYU2 1149 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 KRIT1O00522 736 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 IKBKBO14920 756 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 CLDN11O75508 207 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 VNN1O95497 513 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 C9P02748 559 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 RPN1P04843 607 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 PTMSP20962 102 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 XPAP23025 273 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 MSX1P28360 303 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 ERCC5P28715 1186 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 UBA7P41226 1012 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 SOX8P57073 446 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TUBB3Q13509 450 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 AGERQ15109 404 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TMEM52BQ4KMG9 183 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 ZC3H12AQ5D1E8 599 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 RETSATQ6NUM9 610 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 PAMR1Q6UXH9 720 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 MRGPREQ86SM8 312 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 IRGQQ8WZA9 623 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 MAGED4Q96JG8 741 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TGM7Q96PF1 710 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 PRMT1Q99873 361 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 NDC1Q9BTX1 674 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 LGR4Q9BXB1 951 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TM6SF2Q9BZW4 377 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 RNF32Q9H0A6 362 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 WDR26Q9H7D7 661 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 CYP3A43Q9HB55 503 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 PDRG1Q9NUG6 133 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 TBC1D30Q9Y2I9 924 aa8.87□□□□□ -0.99
UBE2D3-205ENST00000350435 FAM237BA0A1B0GVD1 139 aa8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 ARHGEF9O43307 516 aa8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 ADCY5O95622 1261 aa8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 HOXD4P09016 255 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 UGT1A4P22310 534 aa8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 CASP4P49662 377 aa8.86□□□□□ -0.99
UBE2D3-205ENST00000350435 SERPINH1P50454 418 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms