RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 AKAP13Q12802 2813 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 TRABD2BA6NFA1 517 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 PCSK7Q16549 785 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 CCDC70Q6NSX1 233 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 GUSBP11Q6P575 273 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 ADAMTSL4Q6UY14 1074 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 EFL1Q7Z2Z2 1120 aaKnown RBP27.53■■■□□ 2
ATPAF1-201ENST00000329231 PEX26Q7Z412 305 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 KDELC2Q7Z4H8 507 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 TAF8Q7Z7C8 310 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 ARL10Q8N8L6 244 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 SPATA22Q8NHS9 363 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 HTR3CQ8WXA8 447 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 SCAMP4Q969E2 229 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 FRMD8Q9BZ67 464 aaPredicted RBP27.53■■■□□ 2
ATPAF1-201ENST00000329231 OSBPL8Q9BZF1 889 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 PKD2L2Q9NZM6 624 aa27.53■■■□□ 2
ATPAF1-201ENST00000329231 KLHL8Q9P2G9 620 aaPredicted RBP27.53■■■□□ 2
ATPAF1-201ENST00000329231 RGSL1A5PLK6 1076 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 MT-CYBP00156 380 aaPredicted RBP27.52■■■□□ 2
ATPAF1-201ENST00000329231 MT-CO3P00414 261 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 CEACAM5P06731 702 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 DCBLD1Q8N8Z6 715 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 MAPK15Q8TD08 544 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 FERMT1Q9BQL6 677 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 TMEM168Q9H0V1 697 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 CARS2Q9HA77 564 aaKnown RBP27.52■■■□□ 2
ATPAF1-201ENST00000329231 GULP1Q9UBP9 304 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 PADI4Q9UM07 663 aa27.52■■■□□ 2
ATPAF1-201ENST00000329231 LRP4O75096 1905 aa27.51■■■□□ 2
ATPAF1-201ENST00000329231 H7C0C1 242 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 SOD1P00441 154 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 CAPNS1P04632 268 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 CD68P34810 354 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 ATP5OP48047 213 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 SPINT3P49223 89 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 NOMO1Q15155 1222 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 PID1Q7Z2X4 250 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 UBL4BQ8N7F7 174 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 ALG3Q92685 438 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 RIOK2Q9BVS4 552 aaKnown RBP27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 MAGEE1Q9HCI5 957 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 SIRPGQ9P1W8 387 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 TRIM10Q9UDY6 481 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 FAM153AQ9UHL3 310 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 TRHDEQ9UKU6 1024 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 SLC17A4Q9Y2C5 497 aa27.51■■□□□ 1.99
ATPAF1-201ENST00000329231 MIF4GDA9UHW6 222 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 PMPCBO75439 489 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 NDST3O95803 873 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 ZNF567Q8N184 647 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 CCDC112Q8NEF3 446 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 HIC2Q96JB3 615 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 SRPK1Q96SB4 655 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 ZFYVE1Q9HBF4 777 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 UBP1Q9NZI7 540 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 DKK4Q9UBT3 224 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 IGF2RP11717 2491 aa27.5■■□□□ 1.99
ATPAF1-201ENST00000329231 TJP3O95049 919 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 NFKB1P19838 968 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 TNNT3P45378 269 aaPredicted RBP27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 CDCP2Q5VXM1 449 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 LYSMD3Q7Z3D4 306 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 KYQ8NBH2 561 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 FAM46DQ8NEK8 389 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 MDM1Q8TC05 714 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 ACTL9Q8TC94 416 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 FCRL5Q96RD9 977 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 AGAP2Q99490 1192 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 HERPUD2Q9BSE4 406 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 FAM83DQ9H4H8 585 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 TRNAU1APQ9NX07 287 aaKnown RBP27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 SUFUQ9UMX1 484 aa27.49■■□□□ 1.99
ATPAF1-201ENST00000329231 A0A0U1RQJ8 604 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 IVLP07476 585 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 PYGMP11217 842 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 GNPDA1P46926 289 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 OTUD4Q01804 1114 aaKnown RBP27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 ILF3Q12906 894 aaKnown RBP eCLIP27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 DOK6Q6PKX4 331 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 PROSER1Q86XN7 944 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 RNF10Q8N5U6 811 aaKnown RBP27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 OR6C4Q8NGE1 309 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 NXPE2Q96DL1 559 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 DEPDC7Q96QD5 511 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 GSDMCQ9BYG8 508 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 SUDS3Q9H7L9 328 aaPredicted RBP27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 RAD18Q9NS91 495 aa27.48■■□□□ 1.99
ATPAF1-201ENST00000329231 ARHGAP6O43182 974 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 FUCA1P04066 466 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 PIRTP0C851 137 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 RBL1P28749 1068 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 POLD2P49005 469 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 WNT3AP56704 352 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 CYP4F3Q08477 520 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 PERM1Q5SV97 790 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 HENMT1Q5T8I9 393 aaKnown RBP27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 CDKL3Q8IVW4 592 aaPredicted RBP27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 CCL4L1Q8NHW4 92 aa27.47■■□□□ 1.99
ATPAF1-201ENST00000329231 WDR48Q8TAF3 677 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms