RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 SNX10Q9Y5X0 201 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 CAPGP40121 348 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 GABRB2P47870 512 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 CCL23P55773 120 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 LNX2Q8N448 690 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 LZTR1Q8N653 840 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 FAM13CQ8NE31 585 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 PPP3R2Q96LZ3 170 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 CTPS2Q9NRF8 586 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 ASF1AQ9Y294 204 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 TRAF6Q9Y4K3 522 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 ENPP3O14638 875 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 SMARCB1Q12824 385 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 GLYATQ6IB77 296 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 AGBL3Q8NEM8 1001 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 OR4L1Q8NH43 312 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 TSEN15Q8WW01 171 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 APOLD1Q96LR9 279 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 TCF25Q9BQ70 676 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 LRRC4CQ9HCJ2 640 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 PCDHB9Q9Y5E1 797 aa16.78■□□□□ 0.28
TSPAN3-201ENST00000267970 A0A0X1KG70 313 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 H7C0S8 307 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 ARHGDIBP52566 201 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 SFSWAPQ12872 951 aaKnown RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 PQLC1Q8N2U9 271 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 PPCDCQ96CD2 204 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 BRINP2Q9C0B6 783 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 TCF4P15884 667 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 EPHX2P34913 555 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 MBTD1Q05BQ5 628 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 TOR1AIP1Q5JTV8 583 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 CADM2Q8N3J6 435 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 PTCD2Q8WV60 388 aaKnown RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 RERGQ96A58 199 aaPredicted RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 TBX5Q99593 518 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 CDH22Q9UJ99 828 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 HOXA2O43364 376 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 TFPIP10646 304 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 WASP42768 502 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 CLCN5P51795 746 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 POLR2LP62875 67 aaKnown RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 ZBTB6Q15916 424 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF697Q5TEC3 545 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF730Q6ZMV8 503 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 UBE2R2Q712K3 238 aaPredicted RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 TBC1D21Q8IYX1 336 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 ESAMQ96AP7 390 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 MLXQ9UH92 298 aa16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 CORO1CQ9ULV4 474 aaPredicted RBP16.77■□□□□ 0.28
TSPAN3-201ENST00000267970 RNF225M0QZC1 329 aaPredicted RBP16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 CLPXO76031 633 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 KDM4BO94953 1096 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 FTH1P02794 183 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 MAZP56270 477 aaKnown RBP16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 MPP1Q00013 466 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SEMG2Q02383 582 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SMCO1Q147U7 214 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SNAPC1Q16533 368 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 CXCL17Q6UXB2 119 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 C1orf186Q6ZWK4 172 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 STK40Q8N2I9 435 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 OR2L5Q8NG80 312 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 GIT1Q9Y2X7 761 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 LGALS2P05162 132 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 CSN2P05814 226 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 IGFBP5P24593 272 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 GPR158Q5T848 1215 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 XAGE5Q8WWM1 108 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 EXD2Q9NVH0 621 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 ATXN10Q9UBB4 475 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 ZNF780BQ9Y6R6 833 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 BCKDKO14874 412 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 UGT2B17O75795 530 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 ITGAVP06756 1048 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 TGFBR2P37173 567 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 STARD8Q92502 1023 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 WDR18Q9BV38 432 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 TBC1D17Q9HA65 648 aa16.77■□□□□ 0.27
TSPAN3-201ENST00000267970 SHOX2O60902 331 aaPredicted RBP16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 LRIG2O94898 1065 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 SLC25A14O95258 325 aaPredicted RBP16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 HDCP19113 662 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 TARBP2Q15633 366 aaKnown RBP16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 FSCN1Q16658 493 aaKnown RBP16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 PLEKHG4Q58EX7 1191 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 CDCA5Q96FF9 252 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 ZYG11BQ9C0D3 744 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 PHF24Q9UPV7 400 aa16.76■□□□□ 0.27
TSPAN3-201ENST00000267970 A0A1W2PQ72 361 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms