RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 BOLA2-SMG1P6H3BVE0 249 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 CCNKO75909 580 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 ALOX15P16050 662 aaPredicted RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 AXLP30530 894 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 OR1E1P30953 314 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 ZNF177Q13360 481 aaPredicted RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 HNRNPDQ14103 355 aaKnown RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 OGFOD2Q6N063 350 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 UGT2A3Q6UWM9 527 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 FBXO32Q969P5 355 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 ADPRHL2Q9NX46 363 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 CRNNQ9UBG3 495 aaPredicted RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 OPTCQ9UBM4 332 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 H3BNH8 94 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 NDUFS2O75306 463 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 MAXP61244 160 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 RPL38P63173 70 aaKnown RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 PTPRNQ16849 979 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 TTC23LQ6PF05 361 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 MYDGFQ969H8 173 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 COLEC11Q9BWP8 271 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 ARMC7Q9H6L4 198 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 TIMM22Q9Y584 194 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 SAGE2PA6NJ88 616 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 FAM25AB3EWG3 89 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 FAM25CB3EWG5 89 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 FAM25GB3EWG6 89 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 AREL1O15033 823 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 ZBTB14O43829 449 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 CYP4B1P13584 511 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 DDX5P17844 614 aaKnown RBP14.63□□□□□ -0.07
VPS36-207ENST00000611132 ITGB6P18564 788 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 SLC26A3P40879 764 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 STT3AP46977 705 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 RAB14P61106 215 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 CEP78Q5JTW2 689 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 NIPAL1Q6NVV3 410 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 ZNF621Q6ZSS3 439 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 DYRK4Q9NR20 520 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 MOCS1Q9NZB8 636 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 SNX8Q9Y5X2 465 aa14.63□□□□□ -0.07
VPS36-207ENST00000611132 F8W810 466 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 BCKDKO14874 412 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 TSC22D2O75157 780 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 IFNA14P01570 189 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 TFPTP0C1Z6 253 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 JAG1P78504 1218 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 TRPV3Q8NET8 790 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 NMRK2Q9NPI5 230 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 ABCC13Q9NSE7 274 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 INTS10Q9NVR2 710 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 PIP5K1BO14986 540 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 FADS2O95864 444 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 FTH1P02794 183 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 SLC11A2P49281 568 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 SIM2Q14190 667 aaPredicted RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 RFTN1Q14699 578 aaPredicted RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 TRIQKQ629K1 86 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 CHSY3Q70JA7 882 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 WDTC1Q8N5D0 677 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 MINDY2Q8NBR6 621 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 ZFP14Q9HCL3 533 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 UBAP1Q9NZ09 502 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 ENOPH1Q9UHY7 261 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 RXRGP48443 463 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 C9orf57Q5W0N0 161 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 DCLRE1AQ6PJP8 1040 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 ZC3HC1Q86WB0 502 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 HIPK1Q86Z02 1210 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 CLEC4CQ8WTT0 213 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 GPR22Q99680 433 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 TRIM39Q9HCM9 518 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 RPS6KA6Q9UK32 745 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 DERAQ9Y315 318 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 SAMHD1Q9Y3Z3 626 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 CCDC162PA2VCL2 907 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 SPTLC1O15269 473 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 RGS10O43665 173 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 MT-CYBP00156 380 aaPredicted RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 MTHFD1P11586 935 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 ICAM3P32942 547 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 BCAP31P51572 246 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 SYTL3Q4VX76 610 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 OVOS1Q6IE37 1185 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 TMEM110Q86TL2 294 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 HASPINQ8TF76 798 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 REXO5Q96IC2 774 aaKnown RBP14.62□□□□□ -0.07
VPS36-207ENST00000611132 LMCD1Q9NZU5 365 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 KANSL3Q9P2N6 904 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 IKZF3Q9UKT9 509 aa14.62□□□□□ -0.07
VPS36-207ENST00000611132 MGAT4DA6NG13 374 aa14.61□□□□□ -0.07
VPS36-207ENST00000611132 H0YJX3 145 aa14.61□□□□□ -0.07
VPS36-207ENST00000611132 ARPC2O15144 300 aa14.61□□□□□ -0.07
VPS36-207ENST00000611132 SORBS2O94875 1100 aaKnown RBP14.61□□□□□ -0.07
VPS36-207ENST00000611132 ZNF7P17097 686 aaPredicted RBP14.61□□□□□ -0.07
VPS36-207ENST00000611132 HOXB6P17509 224 aaKnown RBP14.61□□□□□ -0.07
VPS36-207ENST00000611132 HALP42357 657 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms