RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TOP6BLQ8N6T0 577 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 KDM1BQ8NB78 822 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 FAM46DQ8NEK8 389 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 SGMS2Q8NHU3 365 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 UBASH3BQ8TF42 649 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 RAD54LQ92698 747 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 TSACCQ96A04 125 aaPredicted RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 PDLIM2Q96JY6 352 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 RPL10LQ96L21 214 aaKnown RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 Q96MF0 132 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 SPAG5Q96R06 1193 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 C7orf25Q9BPX7 421 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 BPIFA3Q9BQP9 254 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 GPATCH1Q9BRR8 931 aaKnown RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 RUSC1Q9BVN2 902 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 RNF32Q9H0A6 362 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 TNMDQ9H2S6 317 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 CLEC4MQ9H2X3 399 aaPredicted RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 ZNHIT2Q9UHR6 403 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 MAN1B1Q9UKM7 699 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 INTS6Q9UL03 887 aaKnown RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 PADI1Q9ULC6 663 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 AGAP1Q9UPQ3 857 aa4.98□□□□□ -1.61
ERCC1-216ENST00000592444 INTS1Q8N201 2190 aaKnown RBP4.98□□□□□ -1.61
ERCC1-216ENST00000592444 ITIH6Q6UXX5 1313 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TRPM6Q9BX84 2022 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TRIM64A6NGJ6 449 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TRIM64BA6NI03 449 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 RHPN2P1A8MT19 583 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 C21orf140B9A014 251 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 H3BRJ5 948 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 OGTO15294 1046 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 SLC16A4O15374 487 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ARHGEF9O43307 516 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 UNC5CO95185 931 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ALPPP05187 535 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 MYL1P05976 194 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 SRPRAP08240 638 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 PTPN4P29074 926 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 POLR2BP30876 1174 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 GNL1P36915 607 aaPredicted RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 GARSP41250 739 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 BLKP51451 505 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 SGSHP51688 502 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 HK3P52790 923 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 MAZP56270 477 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 KYAT1Q16773 422 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 Q5PR19 223 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ANKRD34AQ69YU3 496 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ZNF324BQ6AW86 544 aaPredicted RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 FCRL6Q6DN72 434 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ZPBP2Q6X784 338 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 CCDC73Q6ZRK6 1079 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 C1orf186Q6ZWK4 172 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 CDC20BQ86Y33 519 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 IRF2BP1Q8IU81 584 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 FAM20CQ8IXL6 584 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 FAM217AQ8IXS0 508 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 BCORP1Q8N888 145 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 GOT1L1Q8NHS2 421 aaPredicted RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 SNX29Q8TEQ0 813 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 CA5BP1Q8WTZ4 195 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TMEM174Q8WUU8 243 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 KBTBD7Q8WVZ9 684 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 OR8D1Q8WZ84 308 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TM9SF4Q92544 642 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 LARP4BQ92615 738 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TMA16Q96EY4 203 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 KLF6Q99612 283 aaPredicted RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 WDR77Q9BQA1 342 aaPredicted RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 ELOVL4Q9GZR5 314 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 NMUR1Q9HB89 426 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 TUFT1Q9NNX1 390 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 LHX9Q9NQ69 397 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 INTS13Q9NVM9 706 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 IL17CQ9P0M4 197 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 CPSF3Q9UKF6 684 aaKnown RBP4.97□□□□□ -1.61
ERCC1-216ENST00000592444 C2CD2Q9Y426 696 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 GTF3C1Q12789 2109 aa4.97□□□□□ -1.61
ERCC1-216ENST00000592444 VWFP04275 2813 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 A0A1W2PQH9 124 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 C1QTNF3-AMACRE9PGA6 284 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 E9PMD0 336 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 ZW10O43264 779 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 SART1O43290 800 aaKnown RBP4.96□□□□□ -1.62
ERCC1-216ENST00000592444 TRIM49P0CI25 452 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 TRIM49CP0CI26 452 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 CD19P15391 556 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 EIF4A3P38919 411 aaKnown RBP4.96□□□□□ -1.62
ERCC1-216ENST00000592444 STK19P49842 368 aaPredicted RBP4.96□□□□□ -1.62
ERCC1-216ENST00000592444 CASP5P51878 434 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 PMS1P54277 932 aaKnown RBP4.96□□□□□ -1.62
ERCC1-216ENST00000592444 CASP6P55212 293 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 COG7P83436 770 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 LAMB3Q13751 1172 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 CAMK4Q16566 473 aa4.96□□□□□ -1.62
ERCC1-216ENST00000592444 C3AR1Q16581 482 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms