RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TIGD7Q6NT04 549 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 FBXL19Q6PCT2 694 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PRR23CQ6ZRP0 262 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 TTC7BQ86TV6 843 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC35F6Q8N357 371 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 TXLNBQ8N3L3 684 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SPATA22Q8NHS9 363 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 P3H4Q92791 437 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 TADA1Q96BN2 335 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 RMDN1Q96DB5 314 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 LRIG1Q96JA1 1093 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 AGAP3Q96P47 875 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 TUBGCP5Q96RT8 1024 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 WRAP53Q9BUR4 548 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 MIR1-1HGQ9H1L0 117 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 ATP13A3Q9H7F0 1226 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 CAPN10Q9HC96 672 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 TM9SF3Q9HD45 589 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PCDH12Q9NPG4 1184 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SMARCAL1Q9NZC9 954 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 DKK3Q9UBP4 350 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 EFR3BQ9Y2G0 817 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 COQ6Q9Y2Z9 468 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 PCDHGA5Q9Y5G8 931 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 SDK1Q7Z5N4 2213 aa9.52□□□□□ -0.89
NPLOC4-219ENST00000576713 A0A1W2PPC4 97 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 A0A1W2PR77 199 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 IGLON5A6NGN9 336 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 LRRC72A6NJI9 287 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CDX4O14627 284 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 KCNK3O14649 394 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PPP1R12AO14974 1030 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 AP1G1O43747 822 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 MT-CYBP00156 380 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ATP1A1P05023 1023 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ALPIP09923 528 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 LHCGRP22888 699 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CD27P26842 260 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 SERPINA4P29622 427 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 MMP12P39900 470 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CD86P42081 329 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ID4P47928 161 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 NR2C2P49116 596 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CSNK1EP49674 416 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 RENBPP51606 427 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CCR5P51681 352 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CLDN2P57739 230 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ITKQ08881 620 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CCDC173Q0VFZ6 552 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 OLIG2Q13516 323 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC45A4Q5BKX6 768 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TRIM61Q5EBN2 209 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TPRG1LQ5T0D9 272 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 RFLNAQ6ZTI6 216 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PRUNE1Q86TP1 453 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TSPAN33Q86UF1 283 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TRIM69Q86WT6 500 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 HORMAD1Q86X24 394 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ZNF567Q8N184 647 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PELI3Q8N2H9 469 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PDCD6IPQ8WUM4 868 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TFB1MQ8WVM0 346 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 OXNAD1Q96HP4 312 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PPP1R16AQ96I34 528 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TEKT5Q96M29 485 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ZNF641Q96N77 438 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TRIB3Q96RU7 358 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 RBM15Q96T37 977 aaKnown RBP eCLIP9.51□□□□□ -0.892e-6■□□□□ 9.1
NPLOC4-219ENST00000576713 KLF6Q99612 283 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 TDRD1Q9BXT4 1180 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 POLR1EQ9GZS1 481 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PCED1AQ9H1Q7 454 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 IL21RQ9HBE5 538 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 PREBQ9HCU5 417 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 DYRK4Q9NR20 520 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 VPS45Q9NRW7 570 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 DLL3Q9NYJ7 618 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 RAI2Q9Y5P3 530 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 RALGAPA1Q6GYQ0 2036 aa9.51□□□□□ -0.89
NPLOC4-219ENST00000576713 ANKRD36A6QL64 1941 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 A0A1B0GVT2 93 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 POM121BA6NF01 834 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 NPIPB15A6NHN6 443 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 BCAT2O15382 392 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 SLC31A1O15431 190 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 PCDH8O95206 1070 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 PGLSO95336 258 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 RECKO95980 971 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 PAK4O96013 591 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 CFIP05156 583 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 RBP3P10745 1247 aa9.5□□□□□ -0.89
NPLOC4-219ENST00000576713 CTPS1P17812 591 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms