RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 ELOVL2Q9NXB9 296 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 IL17CQ9P0M4 197 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 MARCH4Q9P2E8 410 aaPredicted RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 APPL1Q9UKG1 709 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 PLA2G4CQ9UP65 541 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 SLC30A1Q9Y6M5 507 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 OR51F1A6NGY5 319 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 CCL22O00626 93 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 BNIP3LO60238 219 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
TPM1-215ENST00000558868 SLC4A1P02730 911 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
TPM1-215ENST00000558868 CPA3P15088 417 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 BGNP21810 368 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 ALDH3A1P30838 453 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 MC4RP32245 332 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 HNF1BP35680 557 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TAS2R39P59534 338 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 CACNG1Q06432 222 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 ASPHQ12797 758 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 PTPRCAPQ14761 206 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 LYPLAL1Q5VWZ2 237 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 ZDHHC20Q5W0Z9 365 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TANGO2Q6ICL3 276 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 KLC3Q6P597 504 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TPRG1Q6ZUI0 275 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 NUDT18Q6ZVK8 323 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 Q6ZVU0 165 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 LYSMD3Q7Z3D4 306 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 STK40Q8N2I9 435 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 CBARPQ8N350 705 aaPredicted RBP13.77□□□□□ -0.21
TPM1-215ENST00000558868 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 UCMAQ8WVF2 138 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 ASIC4Q96FT7 647 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 NMRAL1Q9HBL8 299 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 TMEM216Q9P0N5 145 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 FKBPLQ9UIM3 349 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 RUVBL2Q9Y230 463 aaKnown RBP13.77□□□□□ -0.21
TPM1-215ENST00000558868 COMMD10Q9Y6G5 202 aa13.77□□□□□ -0.21
TPM1-215ENST00000558868 C1orf232A0A0U1RR37 186 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 PHGDHO43175 533 aaKnown RBP13.76□□□□□ -0.21
TPM1-215ENST00000558868 KLHL2O95198 593 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 ALPIP09923 528 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 SLC35E2BP0CK96 405 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 CYP2A6P11509 494 aaPredicted RBP13.76□□□□□ -0.21
TPM1-215ENST00000558868 PSMC3P17980 439 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 GRK2P25098 689 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 GKP32189 559 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
TPM1-215ENST00000558868 STX3Q13277 289 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 RUNX3Q13761 415 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 FAM83EQ2M2I3 478 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 AGAP9Q5VTM2 703 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 VITQ6UXI7 678 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 FAM47EQ6ZV65 393 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 MTSS1LQ765P7 747 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 ACVR1CQ8NER5 493 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 SCYL1Q96KG9 808 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
TPM1-215ENST00000558868 S1PR5Q9H228 398 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
TPM1-215ENST00000558868 TSPAN11A1L157 253 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 TTC34A8MYJ7 566 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 ECI2O75521 394 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 TGDSO95455 350 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 UGT2B4P06133 528 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 F7P08709 466 aaPredicted RBP13.75□□□□□ -0.21
TPM1-215ENST00000558868 MYL2P10916 166 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 LAMP2P13473 410 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 ITGALP20701 1170 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 SPAM1P38567 509 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 PTGER3P43115 390 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 IRF9Q00978 393 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 ZNF789Q5FWF6 425 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 RBM20Q5T481 1227 aaKnown RBP13.75□□□□□ -0.21
TPM1-215ENST00000558868 GPR153Q6NV75 609 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 C12orf40Q86WS4 652 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 CEP97Q8IW35 865 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 PLD6Q8N2A8 252 aaKnown RBP13.75□□□□□ -0.21
TPM1-215ENST00000558868 ZNF398Q8TD17 642 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms