RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SNX32Q86XE0 403 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 GATAD2AQ86YP4 633 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 AHI1Q8N157 1196 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 FCHO1O14526 889 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 PRMT5O14744 637 aaPredicted RBP17.33■□□□□ 0.36
PTPN21-208ENST00000556564 LRATO95237 230 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 TXNDC11Q6PKC3 985 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 VPS33AQ96AX1 596 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 SGK2Q9HBY8 427 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 INTS7Q9NVH2 962 aaKnown RBP17.33■□□□□ 0.36
PTPN21-208ENST00000556564 INVSQ9Y283 1065 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 PCDHB1Q9Y5F3 818 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 LEFTY2O00292 366 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 ERAL1O75616 437 aaKnown RBP17.33■□□□□ 0.36
PTPN21-208ENST00000556564 UMPSP11172 480 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 GNSP15586 552 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 LBPP18428 481 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 NEK3P51956 506 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 ILF3Q12906 894 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPN21-208ENST00000556564 TADA1Q96BN2 335 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 PIGVQ9NUD9 493 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 FKBPLQ9UIM3 349 aa17.33■□□□□ 0.36
PTPN21-208ENST00000556564 PKMP14618 531 aaKnown RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 TSHRP16473 764 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 TMEM220Q6QAJ8 160 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 VN1R5Q7Z5H4 357 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 RNF148Q8N7C7 305 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 RERGLQ9H628 205 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 OR10H1Q9Y4A9 318 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 TCAF1Q9Y4C2 921 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GNA13Q14344 377 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 TAS1R3Q7RTX0 852 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 C17orf64Q86WR6 236 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 C10orf107Q8IVU9 208 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GPR135Q8IZ08 494 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ATG16L2Q8NAA4 619 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 IL12RB2Q99665 862 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 OSER1Q9NX31 292 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 LIMD1Q9UGP4 676 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 TIMP1P01033 207 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 NMBRP28336 390 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 SERPINB3P29508 390 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 RCN1Q15293 331 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 FGD3Q5JSP0 725 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 SPDYCQ5MJ68 293 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 FBXL22Q6P050 247 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 CMTM8Q8IZV2 173 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 PCDH19Q8TAB3 1148 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ZMAT2Q96NC0 199 aaKnown RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GPR21Q99679 349 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 AARSD1Q9BTE6 412 aaKnown RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 EXOSC4Q9NPD3 245 aaKnown RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ATAD3AQ9NVI7 634 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GRIN2DO15399 1336 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 SOCS7O14512 581 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 CAPN13Q6MZZ7 669 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ZNF784Q8NCA9 323 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GPAT3Q53EU6 434 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 KCTD13Q8WZ19 329 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 NUS1Q96E22 293 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 C1orf50Q9BV19 199 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ACE2Q9BYF1 805 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-208ENST00000556564 GPR62Q9BZJ7 368 aa17.32■□□□□ 0.36
PTPN21-208ENST00000556564 ABHD2P08910 425 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 SIX5Q8N196 739 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 RASGEF1CQ8N431 466 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 C8orf48Q96LL4 319 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 TRIT1Q9H3H1 467 aaKnown RBP17.31■□□□□ 0.36
PTPN21-208ENST00000556564 BLOC1S6Q9UL45 172 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 UBXN8O00124 270 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 TYRP14679 529 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 CSTF3Q12996 717 aaKnown RBP17.31■□□□□ 0.36
PTPN21-208ENST00000556564 SMOQ99835 787 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 ZDHHC4Q9NPG8 344 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 ACSS2Q9NR19 701 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 HS3ST4Q9Y661 456 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 GDPD4Q6W3E5 623 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 EFR3BQ9Y2G0 817 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 KLHL20Q9Y2M5 609 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 NOS3P29474 1203 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 TBCELQ5QJ74 424 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 PRMT9Q6P2P2 845 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 ZC3H7AQ8IWR0 971 aaKnown RBP17.31■□□□□ 0.36
PTPN21-208ENST00000556564 CCT7Q99832 543 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 GMEB2Q9UKD1 530 aa17.31■□□□□ 0.36
PTPN21-208ENST00000556564 IRGCQ6NXR0 463 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 SALL4Q9UJQ4 1053 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 LCA5LO95447 670 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 TNFRSF8P28908 595 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 FRG1Q14331 258 aaKnown RBP17.3■□□□□ 0.36
PTPN21-208ENST00000556564 ANKRD22Q5VYY1 191 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 C16orf87Q6PH81 154 aa17.3■□□□□ 0.36
PTPN21-208ENST00000556564 APTXQ7Z2E3 356 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms