RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 IVLP07476 585 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 MPSTP25325 297 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 AK4P27144 223 aaPredicted RBP16.89■□□□□ 0.29
VPS29-204ENST00000548259 ACTR1BP42025 376 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 ACTR1AP61163 376 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 CTBSQ01459 385 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 SYCP1Q15431 976 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 NAGSQ8N159 534 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 STARD8Q92502 1023 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 MIB2Q96AX9 1013 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 COQ10AQ96MF6 247 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 FRMD8Q9BZ67 464 aaPredicted RBP16.89■□□□□ 0.29
VPS29-204ENST00000548259 LRRC19Q9H756 370 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 FBXO8Q9NRD0 319 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 FZD10Q9ULW2 581 aa16.89■□□□□ 0.29
VPS29-204ENST00000548259 EIF3CLB5ME19 914 aaKnown RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 PPM1DO15297 605 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 VPS4BO75351 444 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 GFPT2O94808 682 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 CYP2A6P11509 494 aaPredicted RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 TEAD1P28347 426 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 CSF2RBP32927 897 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 ADCY8P40145 1251 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 CD97P48960 835 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 PAPOLAP51003 745 aaKnown RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 SCNN1BP51168 640 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 ZNF143P52747 638 aaPredicted RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 GSCP56915 257 aaPredicted RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 CDK3Q00526 305 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 MC2RQ01718 297 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 RAET1GQ6H3X3 334 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 C16orf46Q6P387 395 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 WDR59Q6PJI9 974 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 WDR74Q6RFH5 385 aaPredicted RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 ESX1Q8N693 406 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 SH3KBP1Q96B97 665 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 RTP4Q96DX8 246 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 EIF3CQ99613 913 aaKnown RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 PDP2Q9P2J9 529 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 B4GALT6Q9UBX8 382 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 NOCTQ9UK39 431 aaKnown RBP16.88■□□□□ 0.29
VPS29-204ENST00000548259 VPS4AQ9UN37 437 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 SLC17A4Q9Y2C5 497 aa16.88■□□□□ 0.29
VPS29-204ENST00000548259 RELNP78509 3460 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 SDK2Q58EX2 2172 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 LOC101059948A0A1B0GTJ6 334 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 SIGLEC16A6NMB1 481 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 PSMD11O00231 422 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 SOCS5O75159 536 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 STK17BO94768 372 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 VIPR1P32241 457 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 FASLGP48023 281 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 FMO1Q01740 532 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 MIIPQ5JXC2 388 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 SNAP47Q5SQN1 464 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 DENND2CQ68D51 928 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 DNAJC24Q6P3W2 148 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 EFCAB3Q8N7B9 438 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 SLC20A1Q8WUM9 679 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 PATE1Q8WXA2 126 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 CELF6Q96J87 481 aaKnown RBP16.87■□□□□ 0.29
VPS29-204ENST00000548259 OR2M4Q96R27 311 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 CNPY3Q9BT09 278 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 LRP4O75096 1905 aa16.87■□□□□ 0.29
VPS29-204ENST00000548259 ENO4A6NNW6 628 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 A8MU76 341 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 POLR1CO15160 346 aaPredicted RBP16.86■□□□□ 0.29
VPS29-204ENST00000548259 INPP4BO15327 924 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 CCP110O43303 1012 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 MTSS1O43312 755 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 AGFG2O95081 481 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 OAS2P29728 719 aaKnown RBP16.86■□□□□ 0.29
VPS29-204ENST00000548259 RGRP47804 291 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 LRP8Q14114 963 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 CNGA3Q16281 694 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 TMCO4Q5TGY1 634 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 TCTN3Q6NUS6 607 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 DPY19L2P1Q6NXN4 242 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 DCUN1D2Q6PH85 259 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 UNC5BQ8IZJ1 945 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 BMPERQ8N8U9 685 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 PDCD6IPQ8WUM4 868 aaKnown RBP16.86■□□□□ 0.29
VPS29-204ENST00000548259 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 DTD2Q96FN9 168 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 CTRCQ99895 268 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 PRDM8Q9NQV8 689 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 TMEM9Q9P0T7 183 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 DACH1Q9UI36 760 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 TP53TG5Q9Y2B4 290 aa16.86■□□□□ 0.29
VPS29-204ENST00000548259 TMEM184BQ9Y519 407 aaPredicted RBP16.86■□□□□ 0.29
VPS29-204ENST00000548259 USP9XQ93008 2570 aaPredicted RBP16.85■□□□□ 0.29
VPS29-204ENST00000548259 DFFAO00273 331 aa16.85■□□□□ 0.29
VPS29-204ENST00000548259 EEF2KO00418 725 aaKnown RBP16.85■□□□□ 0.29
VPS29-204ENST00000548259 TRAFD1O14545 582 aaPredicted RBP16.85■□□□□ 0.29
VPS29-204ENST00000548259 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
VPS29-204ENST00000548259 CPP00450 1065 aa16.85■□□□□ 0.29
VPS29-204ENST00000548259 PYGLP06737 847 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms