RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 KLHL3Q9UH77 587 aa13.83□□□□□ -0.2
NKX3-1-202ENST00000523261 PADI1Q9ULC6 663 aa13.83□□□□□ -0.2
NKX3-1-202ENST00000523261 PLEKHM1Q9Y4G2 1056 aa13.83□□□□□ -0.2
NKX3-1-202ENST00000523261 GOLGA6L3A6NEY3 463 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 C21orf140B9A014 251 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 PMM2O15305 246 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 LRRTM2O43300 516 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 THAP12O43422 761 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 NDUFA10O95299 355 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 F9P00740 461 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 ERBB2P04626 1255 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 ANKRD34CP0C6C1 535 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 GNA15P30679 374 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 ME1P48163 572 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 PER3P56645 1201 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 RHOAP61586 193 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 PLEKHN1Q494U1 663 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 NLRP14Q86W24 1093 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 SFRP1Q8N474 314 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 INTS4Q96HW7 963 aaKnown RBP13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 TBCBQ99426 244 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 NUDT9Q9BW91 350 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 LHX9Q9NQ69 397 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 ARMCX3Q9UH62 379 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 DNAI1Q9UI46 699 aa13.82□□□□□ -0.2
NKX3-1-202ENST00000523261 TRBV23OR9-2A0A075B6M9 112 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 BUB1O43683 1085 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 KDELR3O43731 214 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 ZG16O60844 167 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 ELFN1P0C7U0 828 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 HOXB4P17483 251 aaPredicted RBP13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 RPS18P62269 152 aaKnown RBP13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 CDK18Q07002 472 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 BRAT1Q6PJG6 821 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 RASGRP3Q8IV61 690 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 SMYD4Q8IYR2 804 aaPredicted RBP13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 FDCSPQ8NFU4 85 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 EXOC2Q96KP1 924 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 BARD1Q99728 777 aaKnown RBP13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 NCAPGQ9BPX3 1015 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 TEX101Q9BY14 249 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 PHPT1Q9NRX4 125 aaPredicted RBP13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 LHX3Q9UBR4 397 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 LNPEPQ9UIQ6 1025 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
NKX3-1-202ENST00000523261 RAMP2O60895 175 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 PTGER4P35408 488 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 PTGIRP43119 386 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 POLD2P49005 469 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 SH3BP2P78314 561 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 IL10RAQ13651 578 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 INO80DQ53TQ3 878 aaPredicted RBP13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 MANEALQ5VSG8 457 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 AFMIDQ63HM1 303 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 PASD1Q8IV76 773 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 OR6C1Q96RD1 312 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 USP25Q9UHP3 1055 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 SLC17A4Q9Y2C5 497 aa13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 MN1Q10571 1320 aaPredicted RBP13.8□□□□□ -0.2
NKX3-1-202ENST00000523261 SPAG6O75602 509 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 EML2O95834 649 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 IVLP07476 585 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 RHOQP17081 205 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 PTPN4P29074 926 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 EPHA4P54764 986 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 HHEXQ03014 270 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 IL11RAQ14626 422 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 GRM3Q14832 879 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 CRB2Q5IJ48 1285 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 CFAP58Q5T655 872 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 SYVN1Q86TM6 617 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 MMP21Q8N119 569 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 ELMO2Q96JJ3 720 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 ZNF641Q96N77 438 aaPredicted RBP13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 GPR87Q9BY21 358 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 RETREG1Q9H6L5 497 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 AKIRIN1Q9H9L7 192 aaPredicted RBP13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 NEU3Q9UQ49 428 aa13.79□□□□□ -0.2
NKX3-1-202ENST00000523261 MT-ND3P03897 115 aa13.78□□□□□ -0.2
NKX3-1-202ENST00000523261 FGF5P12034 268 aa13.78□□□□□ -0.2
NKX3-1-202ENST00000523261 PFKFB1P16118 471 aa13.78□□□□□ -0.2
NKX3-1-202ENST00000523261 MAPK9P45984 424 aa13.78□□□□□ -0.2
NKX3-1-202ENST00000523261 GFERP55789 205 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms