RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 SNAP23O00161 211 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 RNF103O00237 685 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 QSOX1O00391 747 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 PAPSS1O43252 624 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 ERN1O75460 977 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 TPPPO94811 219 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 PENKP01210 267 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 SRPRAP08240 638 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 ZNF888P0CJ79 500 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 IRF1P10914 325 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 SRCP12931 536 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 TRIM21P19474 475 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 TFEBP19484 476 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 TCEA1P23193 301 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 POU1F1P28069 291 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 IGHMBP2P38935 993 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 CASP3P42574 277 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 CHN2P52757 468 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 TUBB4BP68371 445 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 CAPSQ13938 189 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 RUNX2Q13950 521 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 IL13RA2Q14627 380 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 LY6KQ17RY6 165 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ANKRD20A4Q4UJ75 823 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ANKRD20A8PQ5CZ79 823 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ANKRD20A2Q5SQ80 823 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ANKRD20A1Q5TYW2 823 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ANKRD20A3Q5VUR7 823 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 SLC9A4Q6AI14 798 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 GRHL2Q6ISB3 625 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 RGMBQ6NW40 437 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 TMEM88Q6PEY1 159 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 KDELC1Q6UW63 502 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 C17orf99Q6UX52 265 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 RABEPKQ7Z6M1 372 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 CPXM2Q8N436 756 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 HDDC3Q8N4P3 179 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 PI4KAP1Q8N8J0 262 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 TC2NQ8N9U0 490 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 GRAPLQ8TC17 118 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 NSMCE1Q8WV22 266 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ZNF606Q8WXB4 792 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 SYAP1Q96A49 352 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 TRIM44Q96DX7 344 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 ERO1AQ96HE7 468 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 VPS39Q96JC1 886 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 THUMPD2Q9BTF0 503 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.15□□□□□ -1.42
RFC1-204ENST00000502706 SLITRK6Q9H5Y7 841 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 SLC22A11Q9NSA0 550 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 BABAM1Q9NWV8 329 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 CHCHD3Q9NX63 227 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 VSX1Q9NZR4 365 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 KIAA1456Q9P272 454 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 CTTNBP2NLQ9P2B4 639 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 ARMCX3Q9UH62 379 aaPredicted RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 IL19Q9UHD0 177 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 A4GNTQ9UNA3 340 aa6.15□□□□□ -1.42
RFC1-204ENST00000502706 DDX60Q8IY21 1712 aaKnown RBP6.15□□□□□ -1.42
RFC1-204ENST00000502706 MAPK8IP3Q9UPT6 1336 aa6.15□□□□□ -1.43
RFC1-204ENST00000502706 COL6A3P12111 3177 aa6.15□□□□□ -1.43
RFC1-204ENST00000502706 LRRC72A6NJI9 287 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 YDJCA8MPS7 323 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 PSMD9O00233 223 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 CYR61O00622 381 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 TRIAP1O43715 76 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 MITFO75030 526 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 SUN1O94901 812 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 SIX3O95343 332 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 SLPIP03973 132 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 HEXBP07686 556 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 CYP2A6P11509 494 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 ZNF37AP17032 561 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 ZNF28P17035 718 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 TYMPP19971 482 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 EIF2S2P20042 333 aaKnown RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 TACR2P21452 398 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 PRPH2P23942 346 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 HOXA11P31270 313 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 GJC1P36383 396 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 PRPHP41219 470 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 CLK3P49761 638 aaKnown RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 ANXA11P50995 505 aaKnown RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 GALCP54803 685 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 F2RL1P55085 397 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 SOX10P56693 466 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 HTD2P86397 168 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 TAP1Q03518 808 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 LRRC74AQ0VAA2 488 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 GXYLT1Q4G148 440 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 RBM20Q5T481 1227 aaKnown RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 DRICH1Q6PGQ1 229 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.14□□□□□ -1.43
RFC1-204ENST00000502706 IQCHQ86VS3 1027 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 SIRT6Q8N6T7 355 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFC1-204ENST00000502706 ATAD1Q8NBU5 361 aa6.14□□□□□ -1.43
RFC1-204ENST00000502706 CAMKVQ8NCB2 501 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms