RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PPP1R21Q6ZMI0 780 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 Q6ZSR6 202 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 Q6ZVL8 140 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 SYDE1Q6ZW31 735 aaPredicted RBP15.97■□□□□ 0.15
SSBP1-214ENST00000498107 LYSMD3Q7Z3D4 306 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 TMC3Q7Z5M5 1100 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 TAB3Q8N5C8 712 aaPredicted RBP15.97■□□□□ 0.15
SSBP1-214ENST00000498107 GLIS1Q8NBF1 620 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 BLOC1S5Q8TDH9 187 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 SLCO2A1Q92959 643 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 TCEAL3Q969E4 200 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 AP2M1Q96CW1 435 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 BMFQ96LC9 184 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 SMIM14Q96QK8 99 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 TUBB2BQ9BVA1 445 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 DDX47Q9H0S4 455 aaKnown RBP15.97■□□□□ 0.15
SSBP1-214ENST00000498107 ERVMER34-1Q9H9K5 563 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 SHOC2Q9UQ13 582 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 CA5BQ9Y2D0 317 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 KNL1Q8NG31 2342 aa15.97■□□□□ 0.15
SSBP1-214ENST00000498107 POM121BA6NF01 834 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 H0Y8X5 98 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PDE2AO00408 941 aaPredicted RBP15.96■□□□□ 0.15
SSBP1-214ENST00000498107 YKT6O15498 198 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 CRTAMO95727 393 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 WNT1P04628 370 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PCCBP05166 539 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 C1SP09871 688 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PIRTP0C851 137 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 GM2AP17900 193 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 HTR1BP28222 390 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 CTSKP43235 329 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 SPINT3P49223 89 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PFN3P60673 137 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 SARNPP82979 210 aaKnown RBP15.96■□□□□ 0.15
SSBP1-214ENST00000498107 CDH17Q12864 832 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 GPS1Q13098 491 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 LAMB3Q13751 1172 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 SPARCL1Q14515 664 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PTPRRQ15256 657 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 KIF19Q2TAC6 998 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PNCKQ6P2M8 343 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 GLT6D1Q7Z4J2 308 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PRUNE1Q86TP1 453 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 DNAAF3Q8N9W5 541 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 OR13H1Q8NG92 308 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 KIF18AQ8NI77 898 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 BRSK1Q8TDC3 778 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 ZNF592Q92610 1267 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 APOL2Q9BQE5 337 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 EDEM2Q9BV94 578 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 GTPBP2Q9BX10 602 aaKnown RBP15.96■□□□□ 0.15
SSBP1-214ENST00000498107 FAM83DQ9H4H8 585 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 TMEM9BQ9NQ34 198 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 MBNL1Q9NR56 388 aaKnown RBP15.96■□□□□ 0.15
SSBP1-214ENST00000498107 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.96■□□□□ 0.15
SSBP1-214ENST00000498107 CDC23Q9UJX2 597 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 PKP3Q9Y446 797 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 ZNF292O60281 2723 aa15.96■□□□□ 0.15
SSBP1-214ENST00000498107 CACNB4O00305 520 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 USP12O75317 370 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 HOXC4P09017 264 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 KELP23276 732 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 GPR1P46091 355 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 ARRB1P49407 418 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 DCDC1P59894 354 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 DHX34Q14147 1143 aaKnown RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 INPP5AQ14642 412 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 TAF1AQ15573 450 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 TRIP13Q15645 432 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 RAET1GQ6H3X3 334 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 KIAA2013Q8IYS2 634 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 C19orf43Q9BQ61 176 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 APOOQ9BUR5 198 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 ABCG8Q9H221 673 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 WDR26Q9H7D7 661 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 PHPT1Q9NRX4 125 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 NFKBIL1Q9UBC1 381 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 SPO11Q9Y5K1 396 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 SNX11Q9Y5W9 270 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.95■□□□□ 0.14
SSBP1-214ENST00000498107 USP34Q70CQ2 3546 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 PCDH15Q96QU1 1955 aa15.95■□□□□ 0.14
SSBP1-214ENST00000498107 WDR87Q6ZQQ6 2873 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 SPTY2D1-AS1A0A0U1RR47 76 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 GOLGA8CPA6NN73 597 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 STX7O15400 261 aaKnown RBP15.94■□□□□ 0.14
SSBP1-214ENST00000498107 SLC4A1P02730 911 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 TPSB2P20231 275 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 LPOP22079 712 aaPredicted RBP15.94■□□□□ 0.14
SSBP1-214ENST00000498107 TRIM23P36406 574 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 VPS41P49754 854 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 DR1Q01658 176 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 PDE1CQ14123 709 aaPredicted RBP15.94■□□□□ 0.14
SSBP1-214ENST00000498107 TPSAB1Q15661 275 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 WHAMMP3Q1A5X7 153 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 ZNF423Q2M1K9 1284 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 HLA-BQ31612 363 aa15.94■□□□□ 0.14
SSBP1-214ENST00000498107 PDPK2PQ6A1A2 396 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms