RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 WDR92Q96MX6 357 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 AGAP3Q96P47 875 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 OLFM3Q96PB7 478 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 IL12RB2Q99665 862 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 LRRC61Q9BV99 259 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 LGR4Q9BXB1 951 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 HEMGNQ9BXL5 484 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 TLR10Q9BXR5 811 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CLPBQ9H078 707 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SUDS3Q9H7L9 328 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PCDH9Q9HC56 1237 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 MRPL40Q9NQ50 206 aaKnown RBP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 GOLGA6AQ9NYA3 693 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 NLGN3Q9NZ94 848 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SPASTQ9UBP0 616 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 KLQ9UEF7 1012 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 CD84Q9UIB8 345 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC6-221ENST00000477561 PCDHGA1Q9Y5H4 931 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 LRRK1Q38SD2 2015 aa8.28□□□□□ -1.08
HDAC6-221ENST00000477561 COL5A1P20908 1838 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 LY6G6EA0A0G2JKS1 128 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 A0A0J9YYE9 177 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC66A2RUB6 948 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TRABD2BA6NFA1 517 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 F5H423 210 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CACNB4O00305 520 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TOR1BO14657 336 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 YY2O15391 372 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ZRANB2O95218 330 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 RASGRP1O95267 797 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CLDN7O95471 211 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 PRLP01236 227 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TNFP01375 233 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TRBC1P01850 177 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ANXA6P08133 673 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 C1SP09871 688 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CKMT1AP12532 417 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CES1P23141 567 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ACP1P24666 158 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 NFKBIAP25963 317 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CTNNA2P26232 953 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 BLKP51451 505 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 HK3P52790 923 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 IFI35P80217 286 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 SKOR1P84550 965 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TARDBPQ13148 414 aaKnown RBP eCLIP8.27□□□□□ -1.092e-7■■□□□ 13.5
HDAC6-221ENST00000477561 TFDP2Q14188 446 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 GALNT3Q14435 633 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 PCSK7Q16549 785 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TAZQ16635 292 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CDKN3Q16667 212 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 HES3Q5TGS1 186 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 LRRC66Q68CR7 880 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ZC3H18Q86VM9 953 aaKnown RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 VSIG1Q86XK7 387 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CTAGE4Q8IX94 777 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 RCOR2Q8IZ40 523 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 NDUFAF2Q8N183 169 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CBARPQ8N350 705 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 GALNT15Q8N3T1 639 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 OR56A4Q8NGH8 313 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 SPATA22Q8NHS9 363 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 MDM1Q8TC05 714 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ZCCHC14Q8WYQ9 949 aaKnown RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 OR1E3Q8WZA6 343 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 SCAMP4Q969E2 229 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 DTD2Q96FN9 168 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 PDXPQ96GD0 296 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 HES6Q96HZ4 224 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 MCCC1Q96RQ3 725 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 RBM15Q96T37 977 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TDRD1Q9BXT4 1180 aaKnown RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 WDR26Q9H7D7 661 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 C10orf88Q9H8K7 445 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 FGF22Q9HCT0 170 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 HAUS2Q9NVX0 235 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 SIRPGQ9P1W8 387 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 GULP1Q9UBP9 304 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 AMACRQ9UHK6 382 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 CSNK1G3Q9Y6M4 447 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 U3KQA8 63 aa8.27□□□□□ -1.09
HDAC6-221ENST00000477561 TPRP12270 2363 aaKnown RBP8.27□□□□□ -1.09
HDAC6-221ENST00000477561 hCG_1818297A0A087WSY0 165 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 LMO7DNF2Z398 122 aa8.26□□□□□ -1.09
HDAC6-221ENST00000477561 CASC3O15234 703 aaKnown RBP8.26□□□□□ -1.09
HDAC6-221ENST00000477561 KRT37O76014 449 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms