RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SLC37A2Q8TED4 501 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 AGAP11Q8TF27 550 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 PHF10Q8WUB8 498 aaKnown RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 SYAP1Q96A49 352 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ARHGEF26Q96DR7 871 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 HEPHQ9BQS7 1158 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 DUSP16Q9BY84 665 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 NLNQ9BYT8 704 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ULBP1Q9BZM6 244 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 EPS8L2Q9H6S3 715 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 KCNJ16Q9NPI9 418 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 WASH6PQ9NQA3 447 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ARMCX1Q9P291 453 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 XPO7Q9UIA9 1087 aaKnown RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 RARRES3Q9UL19 164 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 TRIM49BA6NDI0 452 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 YJEFN3A6XGL0 299 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 IDSB3KWA1 339 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 E7ENQ6 273 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 PEX12O00623 359 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TNFRSF10CO14798 259 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 AREL1O15033 823 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 ATMINO43313 823 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TBCAO75347 108 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 STAU1O95793 577 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 RAB40ALP0C0E4 278 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TRIM21P19474 475 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 IDSP22304 550 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 KELP23276 732 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 GKP32189 559 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 CXCR3P49682 368 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 MTM1Q13496 603 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TUBB3Q13509 450 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 SURF1Q15526 300 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 PDCD2Q16342 344 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 ZNF699Q32M78 642 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TSGA10IPQ3SY00 556 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 ZNF667Q5HYK9 610 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 AGAP7PQ5VUJ5 663 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 YTHDF3Q7Z739 585 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 PIGZQ86VD9 579 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 GPBP1Q86WP2 473 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 CBWD2Q8IUF1 395 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 SPPL2CQ8IUH8 684 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 DIS3L2Q8IYB7 885 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 CLYBLQ8N0X4 340 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 GPD1LQ8N335 351 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 PLA2G15Q8NCC3 412 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 AGAP4Q96P64 663 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TGM7Q96PF1 710 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 FCRL4Q96PJ5 515 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 PPP1R9BQ96SB3 815 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 MMTAG2Q9BU76 263 aaKnown RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 MLPHQ9BV36 600 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-206ENST00000471968 RAB34Q9BZG1 259 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 TKTL2Q9H0I9 626 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 ABI3Q9P2A4 366 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 RCAN3Q9UKA8 241 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 L3MBTL1Q9Y468 752 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 HCFC1P51610 2035 aa6.53□□□□□ -1.36
HDAC3-206ENST00000471968 HYDINQ4G0P3 5121 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF233A6NK53 670 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CLDN4O14493 209 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CRYABP02511 175 aaKnown RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 KLK3P07288 261 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 FAM157CP0CG43 387 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 NID1P14543 1247 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CD58P19256 250 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CD53P19397 219 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 TACR2P21452 398 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ATICP31939 592 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ACTR1BP42025 376 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 GNPDA1P46926 289 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 SOX8P57073 446 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ACTR1AP61163 376 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CTBSQ01459 385 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 HHEXQ03014 270 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 INAQ16352 499 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 MIDNQ504T8 468 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 RAB41Q5JT25 222 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 UBAP2Q5T6F2 1119 aaKnown RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 FBXW10Q5XX13 1052 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 PM20D1Q6GTS8 502 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 HEPHL1Q6MZM0 1159 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CYB5D1Q6P9G0 228 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 BLOC1S2Q6QNY1 142 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 C12orf54Q6X4T0 127 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 Q6ZPB1 254 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 LINC00696Q6ZRV3 163 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CAPN12Q6ZSI9 719 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms