RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 WFDC5Q8TCV5 224 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 PYDC1Q8WXC3 89 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 NCSTNQ92542 709 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CMTM5Q96DZ9 223 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 PREBQ9HCU5 417 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 AFF4Q9UHB7 1163 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 IKZF3Q9UKT9 509 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 MED16Q9Y2X0 877 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 BACE2Q9Y5Z0 518 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 OBSL1O75147 1896 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CHD7Q9P2D1 2997 aa15.19■□□□□ 0.02
SCAMP4-202ENST00000409472 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 AIM2O14862 343 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 NPHS1O60500 1241 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 TMCC1O94876 653 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ABLIM3O94929 683 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 NDST3O95803 873 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 GLP2RO95838 553 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 MNX1P50219 401 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 CCNIQ14094 377 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 FBXO48Q5FWF7 155 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 AGAP9Q5VTM2 703 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 RNF219Q5W0B1 726 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 RNF111Q6ZNA4 994 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 PIWIL4Q7Z3Z4 852 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 OR4K2Q8NGD2 314 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF461Q8TAF7 563 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 BRSK1Q8TDC3 778 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 RMDN1Q96DB5 314 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ZFRQ96KR1 1074 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 TDRD1Q9BXT4 1180 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF334Q9HCZ1 680 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 CATSPERZQ9NTU4 200 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 SEPT3Q9UH03 358 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF510Q9Y2H8 683 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 COPG1Q9Y678 874 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 PPP6CO00743 305 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 KDELR3O43731 214 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 MZF1P28698 734 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 NUDT2P50583 147 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 DNAJB13P59910 316 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 DEFB103AP81534 67 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 BTKQ06187 659 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 TBL3Q12788 808 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 OR4D1Q15615 310 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 SPOUT1Q5T280 376 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 CLEC6AQ6EIG7 209 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 PGM2L1Q6PCE3 622 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 LPCAT1Q8NF37 534 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ACTRT2Q8TDY3 377 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 UCMAQ8WVF2 138 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 CDKN2AIPNLQ96HQ2 116 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF599Q96NL3 588 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 GSTO2Q9H4Y5 243 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 TRPM5Q9NZQ8 1165 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 COMMD3-BMI1R4GMX3 469 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 GBF1Q92538 1859 aa15.18■□□□□ 0.02
SCAMP4-202ENST00000409472 INSIG1O15503 277 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CD1DP15813 335 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 PPARGP37231 505 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 STC1P52823 247 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 DSG1Q02413 1049 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 TWF1Q12792 350 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 GSTA3Q16772 222 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CYHR1Q6ZMK1 362 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 GALNT7Q86SF2 657 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CUZD1Q86UP6 607 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 OR4L1Q8NH43 312 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 NAT14Q8WUY8 206 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 PLD4Q96BZ4 506 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 RCN3Q96D15 328 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 TSPAN17Q96FV3 270 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 TTC1Q99614 292 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 MUC3BQ9H195 1237 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 TRPC7Q9HCX4 862 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 GALPQ9UBC7 116 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ANKRD12Q6UB98 2062 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 F8W8V4 182 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CLDN11O75508 207 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 F11P03951 625 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ANPEPP15144 967 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ZNF37AP17032 561 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 CDH13P55290 713 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 TRAF2Q12933 501 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ACAP2Q15057 778 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ADGRF1Q5T601 910 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 METTL21CQ5VZV1 264 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 ACAD11Q709F0 780 aa15.17■□□□□ 0.02
SCAMP4-202ENST00000409472 GLT6D1Q7Z4J2 308 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms