RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 HECTD3Q5T447 861 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ANXA8L1Q5VT79 327 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RSBN1Q5VWQ0 802 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DUPD1Q68J44 220 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SLFN12LQ6IEE8 588 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MZT2AQ6P582 158 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PAPD4Q6PIY7 484 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LAYNQ6UX15 382 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MAMDC2Q7Z304 686 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PRSS42Q7Z5A4 293 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF605Q86T29 641 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 FERMT3Q86UX7 667 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ADGRG3Q86Y34 549 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ECHDC2Q86YB7 292 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 WDR49Q8IV35 697 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 HERC6Q8IVU3 1022 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 GPALPP1Q8IXQ4 340 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 C8orf59Q8N0T1 100 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TAGAPQ8N103 731 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 KRT78Q8N1N4 520 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PCDH20Q8N6Y1 951 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EMC1Q8N766 993 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NDNFQ8TB73 568 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TBC1D15Q8TC07 691 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ELP5Q8TE02 316 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 UTP15Q8TED0 518 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PPP4R1Q8TF05 950 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ESR2Q92731 530 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NELL1Q92832 810 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TANKQ92844 425 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NKD2Q969F2 451 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 E2F7Q96AV8 911 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ISOC1Q96CN7 298 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 AP2M1Q96CW1 435 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TRMT2BQ96GJ1 504 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TOE1Q96GM8 510 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DNAJC1Q96KC8 554 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TEKT5Q96M29 485 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ZSWIM3Q96MP5 696 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LMF1Q96S06 567 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EYA3Q99504 573 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DDX50Q9BQ39 737 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MXD3Q9BW11 206 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MND1Q9BWT6 205 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CADM1Q9BY67 442 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TXLNGYQ9BZA5 131 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NIF3L1Q9GZT8 377 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 USP44Q9H0E7 712 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 WWP1Q9H0M0 922 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MYLK2Q9H1R3 596 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LDAHQ9H6V9 325 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ATP13A3Q9H7F0 1226 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LRRC40Q9H9A6 602 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 UNKLQ9H9P5 680 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NHEJ1Q9H9Q4 299 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MAGEF1Q9HAY2 307 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NECTIN3Q9NQS3 549 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 BIN3Q9NQY0 253 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CNNM1Q9NRU3 951 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DNAJC11Q9NVH1 559 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 INTS13Q9NVM9 706 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MED9Q9NWA0 146 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CMTM6Q9NX76 183 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 GLTPQ9NZD2 209 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SH3BP4Q9P0V3 963 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ARPP21Q9UBL0 812 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EIF3KQ9UBQ5 218 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CNOT8Q9UFF9 292 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DCDC2Q9UHG0 476 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PHF11Q9UIL8 331 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 KLHL21Q9UJP4 597 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PRPF19Q9UMS4 504 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PHTF1Q9UMS5 762 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SNX6Q9UNH7 406 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RUVBL1Q9Y265 456 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SIK3Q9Y2K2 1263 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PCDHA5Q9Y5H7 936 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PCDHA13Q9Y5I0 950 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MAGED1Q9Y5V3 778 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 IRAK3Q9Y616 596 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RNF215Q9Y6U7 377 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CHD1O14646 1710 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ABCC6O95255 1503 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 A2MP01023 1474 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TNRQ92752 1358 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TSPOAP1O95153 1857 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NEDD4P46934 1319 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 A0A1W2PRG0 241 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM120BA0PK00 339 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 A8MUI8 341 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 LGALS16A8MUM7 142 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 MCIDASD6RGH6 385 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 H3BNH8 94 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 H7C2Y5 167 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 CDC7O00311 574 aa3.6□□□□□ -1.83
XRCC4-203ENST00000396027 RTCAO00442 366 aaKnown RBP3.6□□□□□ -1.83
XRCC4-203ENST00000396027 NOP56O00567 594 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms