RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 C1orf226A1L170 272 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 AKR1B15C9JRZ8 316 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 SPRY3O43610 288 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 ITM2AO43736 263 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 ENTPD3O75355 529 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 DAB1O75553 588 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 JRKO75564 520 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 ERAL1O75616 437 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 BEST1O76090 585 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 TPPPO94811 219 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 VNN2O95498 520 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 TUBBP07437 444 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NR2F1P10589 423 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NAGAP17050 411 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 DDX5P17844 614 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PON1P27169 355 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NNMTP40261 264 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 EIF2DP41214 584 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 SLC15A1P46059 708 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 RFX2P48378 723 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 METAP2P50579 478 aaKnown RBP eCLIP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PLCD1P51178 756 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 MRPL12P52815 198 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 RAD23BP54727 409 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 MFAP4P55083 255 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 TAS2R40P59535 323 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 IFI35P80217 286 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 MRPS21P82921 87 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 MRPS34P82930 218 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 IKQ13123 557 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NAB2Q15742 525 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 CCDC142Q17RM4 750 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PPP6R3Q5H9R7 873 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 DNTTIP2Q5QJE6 756 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 LRIF1Q5T3J3 769 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 METTL2BQ6P1Q9 378 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 CRELD2Q6UXH1 353 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 TSPAN33Q86UF1 283 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PIM3Q86V86 326 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 SPATA6LQ8N4H0 392 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 HJURPQ8NCD3 748 aaPredicted RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 JAKMIP2Q96AA8 810 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 METTL2AQ96IZ6 378 aaKnown RBP3.17□□□□□ -1.9
PTPRC-205ENST00000391970 HARBI1Q96MB7 349 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PCGF1Q9BSM1 259 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 HAUS8Q9BT25 410 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 KCNN2Q9H2S1 579 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NDST4Q9H3R1 872 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 WDR26Q9H7D7 661 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 PPP1R3EQ9H7J1 279 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 LTB4R2Q9NPC1 389 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 NENFQ9UMX5 172 aa3.17□□□□□ -1.9
PTPRC-205ENST00000391970 A0A1B0GVM2 712 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 CTDSP2O14595 271 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 TNFRSF13BO14836 293 aaPredicted RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ATP2A1O14983 1001 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 P4HA2O15460 535 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ASAP2O43150 1006 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 HSPA12AO43301 675 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 PLOD3O60568 738 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 TOMM40O96008 361 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ADRB2P07550 413 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 G6PDP11413 515 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ACTN1P12814 892 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 IL11P20809 199 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ACADLP28330 430 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 HOXC9P31274 260 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 HNRNPH1P31943 449 aaKnown RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 KRT20P35900 424 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 EIF2S3P41091 472 aaKnown RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 NR4A2P43354 598 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 NUDT6P53370 316 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ROR2Q01974 943 aaKnown RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 LRMPQ12912 555 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 GPS2Q13227 327 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 PCLAFQ15004 111 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 EFNB3Q15768 340 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 LEXMQ3ZCV2 418 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 FSCBQ5H9T9 825 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 FNBP1LQ5T0N5 605 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 MFSD4BQ5TF39 518 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 GGNBP1Q5YKI7 109 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 TMCO3Q6UWJ1 677 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 B3GNT6Q6ZMB0 384 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 C1QL2Q7Z5L3 287 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 PRPF39Q86UA1 669 aaKnown RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 TICAM2Q86XR7 235 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 LINC00346Q8IVM7 164 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 SCML4Q8N228 414 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 POC5Q8NA72 575 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 IL17RCQ8NAC3 791 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 SAT2Q96F10 170 aaPredicted RBP3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ZNF778Q96MU6 729 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 LRFN5Q96NI6 719 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 SH3GL2Q99962 352 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 SLF1Q9BQI6 1058 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 ANP32EQ9BTT0 268 aa3.16□□□□□ -1.9
PTPRC-205ENST00000391970 C1QTNF1Q9BXJ1 281 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms