RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SMAPO00193 183 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 ENTPD5O75356 428 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 CD63P08962 238 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 EEF1DP29692 281 aaKnown RBP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 ARCN1P48444 511 aaKnown RBP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 CCDC81Q6ZN84 652 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 IFNEQ86WN2 208 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 MRPL43Q8N983 215 aaKnown RBP9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 CYP2S1Q96SQ9 504 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 ROGDIQ9GZN7 287 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 ING2Q9H160 280 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 MAGEH1Q9H213 219 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 MTRRQ9UBK8 725 aa9.2□□□□□ -0.94
LIMCH1-202ENST00000381753 RNF103O00237 685 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 CXADRP78310 365 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ACY1Q03154 408 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 EPM2AIP1Q7L775 607 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 LIX1LQ8IVB5 337 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ZDHHC1Q8WTX9 485 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PRRG3Q9BZD7 231 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ATAD3AQ9NVI7 634 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 AHDC1Q5TGY3 1603 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MYBPHLA2RUH7 354 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 TP53I11O14683 189 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 GNGT1P63211 74 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ADCY2Q08462 1091 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ADGRF1Q5T601 910 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ERN2Q76MJ5 926 aaKnown RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 STRA8Q7Z7C7 330 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PPIL6Q8IXY8 311 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 OR4E2Q8NGC2 313 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 OR6C4Q8NGE1 309 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 RELTQ969Z4 430 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 SLC12A4Q9UP95 1085 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MTMR11A4FU01 709 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MKRN2OSH3BPM6 223 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MT-ND5P03915 603 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 P04436 131 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MSX1P28360 303 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ECH1Q13011 328 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MAD2L1Q13257 205 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 UBE2R2Q712K3 238 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 METTL27Q8N6F8 245 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 KCTD13Q8WZ19 329 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 NXPE2Q96DL1 559 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ZNF514Q96K75 400 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 FRMD8Q9BZ67 464 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 CCSER2Q9H7U1 834 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 HRASLS2Q9NWW9 162 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 C4orf47A7E2U8 309 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 DFNA5O60443 496 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 SPAG6O75602 509 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 VAPBO95292 243 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 RHOQP17081 205 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ATP4AP20648 1035 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 NUDT1P36639 197 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 GRK6P43250 576 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 GALK1P51570 392 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 CLEC4DQ8WXI8 215 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 ANKS1AQ92625 1134 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PRICKLE1Q96MT3 831 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PCBD2Q9H0N5 130 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 MRM3Q9HC36 420 aaKnown RBP9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 NGBQ9NPG2 151 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 PCDHB10Q9UN67 800 aa9.19□□□□□ -0.94
LIMCH1-202ENST00000381753 HACD1B0YJ81 288 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 GOLGA8RI6L899 631 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 LILRB3O75022 631 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 MFAP3LO75121 409 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 WDR47O94967 919 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 KCNA3P22001 575 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 GLDCP23378 1020 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 WARSP23381 471 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 MAPKAPK2P49137 400 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 SERPINB8P50452 374 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 AFF3P51826 1226 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 ZNF252P-AS1Q0IIN9 211 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 DCAF12L1Q5VU92 463 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 RHBDF2Q6PJF5 856 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 SHC4Q6S5L8 630 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 TMEM161BQ8NDZ6 487 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 CASKIN2Q8WXE0 1202 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 TOP1MTQ969P6 601 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 OR2M4Q96R27 311 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 TBL1XR1Q9BZK7 514 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 NMRAL1Q9HBL8 299 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 NEU2Q9Y3R4 380 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 AKAP8O43823 692 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 PHF2O75151 1096 aa9.18□□□□□ -0.94
LIMCH1-202ENST00000381753 ITGB1P05556 798 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms