RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RHDQ02161 417 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 PDAP1Q13442 181 aaKnown RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 AGKQ53H12 422 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 CWF19L1Q69YN2 538 aaKnown RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 C19orf60Q96EN9 201 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 TBATAQ96M53 351 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 RPRD1AQ96P16 312 aaPredicted RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 GCNAQ96QF7 691 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 PKP2Q99959 881 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 MGME1Q9BQP7 344 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 PIDD1Q9HB75 910 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 TCRBV3S1A0A5B6 114 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 ENO4A6NNW6 628 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 E7ENX8 843 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 GOT2P00505 430 aaKnown RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 SMIM18P0DKX4 95 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 CKBP12277 381 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 OR1G1P47890 313 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 STC1P52823 247 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 CTXN3Q4LDR2 81 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 SAMD4BQ5PRF9 694 aaKnown RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 NECAB2Q7Z6G3 386 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 SPDYE1Q8NFV5 336 aaPredicted RBP25.04■■□□□ 1.6
ROM1-201ENST00000278833 PHF21BQ96EK2 531 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 ZNF696Q9H7X3 374 aa25.04■■□□□ 1.6
ROM1-201ENST00000278833 TANC1Q9C0D5 1861 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 NRP2O60462 931 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 CRTAMO95727 393 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 NDST3O95803 873 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 KCNC1P48547 511 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 ZNF235Q14590 738 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 SPATS1Q496A3 300 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 RAB44Q7Z6P3 723 aaPredicted RBP25.03■■□□□ 1.6
ROM1-201ENST00000278833 C2orf15Q8WU43 125 aaKnown RBP25.03■■□□□ 1.6
ROM1-201ENST00000278833 DNAJC1Q96KC8 554 aaKnown RBP25.03■■□□□ 1.6
ROM1-201ENST00000278833 CEP295NLQ96MC4 621 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 GLT1D1Q96MS3 346 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 ATOH8Q96SQ7 321 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 C11orf49Q9H6J7 331 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 COPS7BQ9H9Q2 264 aaPredicted RBP25.03■■□□□ 1.6
ROM1-201ENST00000278833 CATSPERZQ9NTU4 200 aa25.03■■□□□ 1.6
ROM1-201ENST00000278833 MRPL42Q9Y6G3 142 aaKnown RBP25.03■■□□□ 1.6
ROM1-201ENST00000278833 SLC12A8A0AV02 714 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 CCDC162PA2VCL2 907 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 MRASO14807 208 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 SRP72O76094 671 aaKnown RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 SUPT7LO94864 414 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 TACR2P21452 398 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 FGFR3P22607 806 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 PLK1P53350 603 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 STX1BP61266 288 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 PPP1R3AQ16821 1122 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 COQ5Q5HYK3 327 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 C10orf120Q5SQS8 335 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 KANK2Q63ZY3 851 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 NAIF1Q69YI7 327 aaPredicted RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 NADSYN1Q6IA69 706 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 PIM3Q86V86 326 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 BBS5Q8N3I7 341 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 MAGEH1Q9H213 219 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 ELAC1Q9H777 363 aaKnown RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 ADA2Q9NZK5 511 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 CROTQ9UKG9 612 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 KCTD3Q9Y597 815 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 AP4B1Q9Y6B7 739 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 OR51F1A6NGY5 319 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 MUSKO15146 869 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 SERPINF2P08697 491 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 GPX3P22352 226 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 OR1E1P30953 314 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 GRIA2P42262 883 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 TAF10Q12962 218 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 PRMT9Q6P2P2 845 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 FAM43BQ6ZT52 329 aaPredicted RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 SPATA24Q86W54 205 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 CDK5RAP1Q96SZ6 601 aaKnown RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 SLC2A11Q9BYW1 496 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 STARD7Q9NQZ5 370 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 NLE1Q9NVX2 485 aaPredicted RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 TMEM161AQ9NX61 479 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 PADI4Q9UM07 663 aa25.02■■□□□ 1.6
ROM1-201ENST00000278833 MTF2Q9Y483 593 aaPredicted RBP25.02■■□□□ 1.6
ROM1-201ENST00000278833 MTMR11A4FU01 709 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 TBC1D4O60343 1298 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 MATN4O95460 622 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 MTHFD2P13995 350 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 CD9P21926 228 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 HOXD9P28356 352 aaPredicted RBP25.01■■□□□ 1.59
ROM1-201ENST00000278833 ACVRL1P37023 503 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 ZNF140P52738 457 aaPredicted RBP25.01■■□□□ 1.59
ROM1-201ENST00000278833 GPR17Q13304 367 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 MBTPS1Q14703 1052 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 CNPY1Q3B7I2 92 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 RASIP1Q5U651 963 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 LDB1Q86U70 411 aaPredicted RBP25.01■■□□□ 1.59
ROM1-201ENST00000278833 TTC9BQ8N6N2 239 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 GOLM1Q8NBJ4 401 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 OR4L1Q8NH43 312 aa25.01■■□□□ 1.59
ROM1-201ENST00000278833 FAM193BQ96PV7 902 aaPredicted RBP25.01■■□□□ 1.59
ROM1-201ENST00000278833 TCF12Q99081 682 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms