RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 HINT3Q9NQE9 182 aaKnown RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 NAP1L2Q9ULW6 460 aaPredicted RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 PCDHA7Q9UN72 937 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 MTMR6Q9Y217 621 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 PTGES3LE9PB15 166 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 AP3D1O14617 1153 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 DAB1O75553 588 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 HOXC6P09630 235 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 IL7RP16871 459 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 PPARGP37231 505 aaPredicted RBP4.5□□□□□ -1.69
CCDC54-201ENST00000261058 ZBED6P86452 979 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 SORDQ00796 357 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 IRF3Q14653 427 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 KCTD2Q14681 263 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 TDRD12Q587J7 1177 aaKnown RBP4.5□□□□□ -1.69
CCDC54-201ENST00000261058 PLEKHS1Q5SXH7 462 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 B3GNT6Q6ZMB0 384 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 CFAP77Q6ZQR2 320 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 CHST9Q7L1S5 443 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 SZRD1Q7Z422 152 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 TICAM1Q8IUC6 712 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 SPATA6LQ8N4H0 392 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 C1orf131Q8NDD1 294 aaKnown RBP4.5□□□□□ -1.69
CCDC54-201ENST00000261058 ASB5Q8WWX0 329 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 RRNAD1Q96FB5 475 aaKnown RBP4.5□□□□□ -1.69
CCDC54-201ENST00000261058 ACOX2Q99424 681 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 SLC25A33Q9BSK2 321 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 RRP7BPQ9NSQ0 103 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 HAUS2Q9NVX0 235 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 MAU2Q9Y6X3 613 aa4.5□□□□□ -1.69
CCDC54-201ENST00000261058 A0A0U1RQJ8 604 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 VDRP11473 427 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 ACADLP28330 430 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 HOXC9P31274 260 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 EIF2S3P41091 472 aaKnown RBP4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CLCN3P51790 818 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CDH8P55286 799 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 MC1RQ01726 317 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 BNC1Q01954 994 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CUL4AQ13619 759 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 PDE1CQ14123 709 aaPredicted RBP4.49□□□□□ -1.69
CCDC54-201ENST00000261058 GGNBP1Q5YKI7 109 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 C16orf54Q6UWD8 224 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CRELD2Q6UXH1 353 aaPredicted RBP4.49□□□□□ -1.69
CCDC54-201ENST00000261058 HACE1Q8IYU2 909 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
CCDC54-201ENST00000261058 OR14L1PQ8NHC6 308 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 B4GALNT2Q8NHY0 566 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 OIT3Q8WWZ8 545 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 OR2A14Q96R47 310 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CCDC68Q9H2F9 335 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 SH2D4AQ9H788 454 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 PPP1R3EQ9H7J1 279 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 GPR108Q9NPR9 543 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 HIF1ANQ9NWT6 349 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 SESN1Q9Y6P5 492 aa4.49□□□□□ -1.69
CCDC54-201ENST00000261058 BTBD18B2RXH4 712 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 VCYO14598 125 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 ZIC3O60481 467 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 NDUFS7O75251 213 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 JRKO75564 520 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE7O76087 117 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GLUD1P00367 558 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CSH1P0DML2 217 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CSH2P0DML3 217 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 PORP16435 677 aaPredicted RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 RPL3P39023 403 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GLUD2P49448 558 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 TAS2R40P59535 323 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CRYZQ08257 329 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 DSC1Q08554 894 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 EPS8Q12929 822 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE1Q13065 139 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 GAGE4Q13068 117 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 TRAF3Q13114 568 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 EIF2S3LQ2VIR3 472 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 ZNF260Q3ZCT1 412 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 EFHC1Q5JVL4 640 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 ZC3HC1Q86WB0 502 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CCDC13Q8IYE1 715 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 TRPC4APQ8TEL6 797 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 FAM216AQ8WUB2 273 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 CCDC34Q96HJ3 373 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 MRPL44Q9H9J2 332 aaKnown RBP4.48□□□□□ -1.69
CCDC54-201ENST00000261058 SETD4Q9NVD3 440 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 TINAGQ9UJW2 476 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 RCOR1Q9UKL0 485 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 ARHGEF40Q8TER5 1519 aa4.48□□□□□ -1.69
CCDC54-201ENST00000261058 MYMKA6NI61 221 aa4.47□□□□□ -1.69
CCDC54-201ENST00000261058 HNRNPCL1O60812 293 aaKnown RBP4.47□□□□□ -1.69
CCDC54-201ENST00000261058 PGM3O95394 542 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms