RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FCHO2Q0JRZ9 810 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 VITQ6UXI7 678 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 CCDC91Q7Z6B0 441 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 FRS2Q8WU20 508 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 SORCS1Q8WY21 1168 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 TSSK1BQ9BXA7 367 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 C1QTNF1Q9BXJ1 281 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 NMRAL1Q9HBL8 299 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 BPIFA1Q9NP55 256 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 COPG2Q9UBF2 871 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 MID2Q9UJV3 735 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 VPS9D1Q9Y2B5 631 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 PPIL1Q9Y3C6 166 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 USP15Q9Y4E8 981 aaPredicted RBP18.13■□□□□ 0.49
VIM-201ENST00000224237 C1orf232A0A0U1RR37 186 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 IL1BP01584 269 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 HNF1BP35680 557 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 MESP2Q0VG99 397 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 ZNF460Q14592 562 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 CHI3L2Q15782 390 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 TSNAXIP1Q2TAA8 658 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 RNF187Q5TA31 235 aaPredicted RBP18.12■□□□□ 0.49
VIM-201ENST00000224237 CGB2Q6NT52 195 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 USP45Q70EL2 814 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 ZSWIM9Q86XI8 627 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 TTC8Q8TAM2 541 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 OLFM1Q99784 485 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 S1PR5Q9H228 398 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 TTYH1Q9H313 450 aaPredicted RBP18.12■□□□□ 0.49
VIM-201ENST00000224237 CLDND1Q9NY35 253 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 LMCD1Q9NZU5 365 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 DEC1Q9P2X7 70 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 CRYL1Q9Y2S2 319 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 VWA7Q9Y334 891 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 UGT2B4P06133 528 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 ST8SIA6P61647 398 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 PEX6Q13608 980 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 PCLAFQ15004 111 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 PTPRNQ16849 979 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 GAB4Q2WGN9 574 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 AARS2Q5JTZ9 985 aaKnown RBP18.12■□□□□ 0.49
VIM-201ENST00000224237 GRAMD4Q6IC98 578 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 OTOAQ7RTW8 1153 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 TBC1D1Q86TI0 1168 aaPredicted RBP18.12■□□□□ 0.49
VIM-201ENST00000224237 CENPLQ8N0S6 344 aaPredicted RBP18.12■□□□□ 0.49
VIM-201ENST00000224237 PNPLA1Q8N8W4 532 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 CHST14Q8NCH0 376 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 EID2BQ96D98 161 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 SCRN2Q96FV2 425 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 HEPHQ9BQS7 1158 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 HPS4Q9NQG7 708 aa18.12■□□□□ 0.49
VIM-201ENST00000224237 A0A0U1RQS6 177 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 TTC34A8MYJ7 566 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 KLHL2O95198 593 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 TTPAP49638 278 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 KPNA2P52292 529 aaKnown RBP18.11■□□□□ 0.49
VIM-201ENST00000224237 GRM2Q14416 872 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 GRIN2CQ14957 1233 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 EIF4HQ15056 248 aaKnown RBP18.11■□□□□ 0.49
VIM-201ENST00000224237 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 CPA6Q8N4T0 437 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 KCTD4Q8WVF5 259 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 PLA2G2FQ9BZM2 168 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 ELOVL2Q9NXB9 296 aa18.11■□□□□ 0.49
VIM-201ENST00000224237 NDUFS3O75489 264 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 PRSS56P0CW18 603 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 ALDH3A1P30838 453 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 PGGT1BP53609 377 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
VIM-201ENST00000224237 XIAPP98170 497 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 ADGRE1Q14246 886 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 CDKN3Q16667 212 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 ZRANB3Q5FWF4 1079 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 TPRG1Q6ZUI0 275 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 YAF2Q8IY57 180 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 PPP1R14CQ8TAE6 165 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 RDH11Q8TC12 318 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 GRIN3AQ8TCU5 1115 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 MCCC1Q96RQ3 725 aaPredicted RBP18.1■□□□□ 0.49
VIM-201ENST00000224237 PLCD4Q9BRC7 762 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 GPAMQ9HCL2 828 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 PLA2G4CQ9UP65 541 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 RUVBL2Q9Y230 463 aaKnown RBP18.1■□□□□ 0.49
VIM-201ENST00000224237 MTCH2Q9Y6C9 303 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 COL4A3Q01955 1670 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 SCN8AQ9UQD0 1980 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 KIAA1549LQ6ZVL6 1849 aa18.1■□□□□ 0.49
VIM-201ENST00000224237 CLDN7O95471 211 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 CPA3P15088 417 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 KCNA4P22459 653 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 LTBRP36941 435 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 SLC6A11P48066 632 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 CACNG1Q06432 222 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 BST1Q10588 318 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 SF3A3Q12874 501 aaKnown RBP eCLIP18.09■□□□□ 0.49
VIM-201ENST00000224237 NAIF1Q69YI7 327 aaPredicted RBP18.09■□□□□ 0.49
VIM-201ENST00000224237 PSAPL1Q6NUJ1 521 aa18.09■□□□□ 0.49
VIM-201ENST00000224237 SREK1Q8WXA9 508 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms