RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 OR1E3Q8WZA6 343 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 EXTL1Q92935 676 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 FUBP1Q96AE4 644 aaKnown RBP14.65□□□□□ -0.06
SRRT-219ENST00000641476 CCDC74AQ96AQ1 378 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 GRAMD1AQ96CP6 724 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 RBM15Q96T37 977 aaKnown RBP eCLIP14.65□□□□□ -0.069e-8■■□□□ 11.6
SRRT-219ENST00000641476 MGME1Q9BQP7 344 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 WDR26Q9H7D7 661 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 PCDH18Q9HCL0 1135 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 STARD5Q9NSY2 213 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 GULP1Q9UBP9 304 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 RABGEF1Q9UJ41 708 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 GPR34Q9UPC5 381 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 DGKBQ9Y6T7 804 aa14.65□□□□□ -0.06
SRRT-219ENST00000641476 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 TMEM202A6NGA9 273 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 CACNB4O00305 520 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 EFSO43281 561 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 HTRA2O43464 458 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 NTRK1P04629 796 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 SERPINB6P35237 376 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 POLR2LP62875 67 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 TPM4P67936 248 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 SPIDRQ14159 915 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 PIGHQ14442 188 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 CNGA3Q16281 694 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 BOLA3Q53S33 107 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 USP53Q70EK8 1073 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 CLEC14AQ86T13 490 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 PELI3Q8N2H9 469 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 SDR16C5Q8N3Y7 309 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 OR56A4Q8NGH8 313 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 WDR36Q8NI36 951 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 PDCD6IPQ8WUM4 868 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 SCG3Q8WXD2 468 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 SYN2Q92777 582 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 NUS1Q96E22 293 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 NUDCD1Q96RS6 583 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
SRRT-219ENST00000641476 MRPL40Q9NQ50 206 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 ATXN7L1Q9ULK2 861 aaPredicted RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 BZW2Q9Y6E2 419 aaKnown RBP14.64□□□□□ -0.07
SRRT-219ENST00000641476 A0A087X0T9 212 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 A8MX80 341 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 D6RAR5 112 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 NTN3O00634 580 aaPredicted RBP14.63□□□□□ -0.07
SRRT-219ENST00000641476 SUV39H1O43463 412 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 MFSD11O43934 449 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 MAFKO60675 156 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 TNFP01375 233 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 SERPING1P05155 500 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 CYP1A2P05177 515 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 FAM87AP0C7U9 286 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 FAM228BP0C875 321 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 MAXP61244 160 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 ZBED6P86452 979 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 TRAF2Q12933 501 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 ACOX1Q15067 660 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 COQ10AQ96MF6 247 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 NOD2Q9HC29 1040 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 ANKMY1Q9P2S6 941 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 IP6K2Q9UHH9 426 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 PCDHGC4Q9Y5F7 938 aa14.63□□□□□ -0.07
SRRT-219ENST00000641476 A0A1W2PQ67 120 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 HEXIM1O94992 359 aaKnown RBP14.62□□□□□ -0.07
SRRT-219ENST00000641476 GYPCP04921 128 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 ITGA2BP08514 1039 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 HOXC4P09017 264 aaPredicted RBP14.62□□□□□ -0.07
SRRT-219ENST00000641476 ITGB6P18564 788 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 LHCGRP22888 699 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 KELP23276 732 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 VIPR1P32241 457 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 TRIM23P36406 574 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 MMP13P45452 471 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 CDH6P55285 790 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 UBASH3AP57075 661 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 SRSF6Q13247 344 aaKnown RBP14.62□□□□□ -0.07
SRRT-219ENST00000641476 KRT81Q14533 505 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 B3GNT8Q7Z7M8 397 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 BBS5Q8N3I7 341 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 GPR156Q8NFN8 814 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 SGF29Q96ES7 293 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 DTD2Q96FN9 168 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 LGR4Q9BXB1 951 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 RCOR3Q9P2K3 495 aaPredicted RBP14.62□□□□□ -0.07
SRRT-219ENST00000641476 CAPN11Q9UMQ6 739 aa14.62□□□□□ -0.07
SRRT-219ENST00000641476 CCDC187A0A096LP49 1063 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 PRSS38A1L453 326 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 NPIPB15A6NHN6 443 aaPredicted RBP14.61□□□□□ -0.07
SRRT-219ENST00000641476 B4DGG1 531 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 TNFRSF10CO14798 259 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 ITGB2P05107 769 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 RPLP0P05388 317 aaKnown RBP14.61□□□□□ -0.07
SRRT-219ENST00000641476 CD48P09326 243 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 MYCLP1P12525 358 aaPredicted RBP14.61□□□□□ -0.07
SRRT-219ENST00000641476 GJC1P36383 396 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 MLLT3P42568 568 aaPredicted RBP14.61□□□□□ -0.07
SRRT-219ENST00000641476 MMRN1Q13201 1228 aa14.61□□□□□ -0.07
SRRT-219ENST00000641476 TGIF1Q15583 401 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms