RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 NDRG1Q92597 394 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 ZNF350Q9GZX5 532 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 DRG1Q9Y295 367 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 FAM153BP0C7A2 387 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 HSPB3Q12988 150 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 FAM153CQ494X1 144 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 HMBOX1Q6NT76 420 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 RFWD3Q6PCD5 774 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 SPESP1Q6UW49 350 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CAMK1DQ8IU85 385 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 DEFB106AQ8N104 65 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 OR52K1Q8NGK4 314 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 HPF1Q9NWY4 346 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 PLOD2O00469 737 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 TM9SF1O15321 606 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 DRG2P55039 364 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 IFI35P80217 286 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 PAGE2BQ5JRK9 111 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 SGK2Q9HBY8 427 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 KDM6BO15054 1643 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 C5orf51A6NDU8 294 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 STBD1O95210 358 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CDH3P22223 829 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 PDK2Q15119 407 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CIR1Q86X95 450 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 COPS5Q92905 334 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 SLC47A1Q96FL8 570 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 MEAF6Q9HAF1 191 aa16.4■□□□□ 0.22
CACNA1A-238ENST00000637276 CST1P01037 141 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 GJB1P08034 283 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 GLI1P08151 1106 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 NEK3P51956 506 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CHN2P52757 468 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 SLC13A2Q13183 592 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 OLFML1Q6UWY5 402 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CLPXO76031 633 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 SUPT20HL2P0C7V6 817 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 LHCGRP22888 699 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 ELOAQ14241 798 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 NR1D2Q14995 579 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 LINGO4Q6UY18 593 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 TEX19Q8NA77 164 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 FBXO25Q8TCJ0 367 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 GRHL3Q8TE85 626 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 DEFB118Q96PH6 123 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CYP2S1Q96SQ9 504 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 ARL5AQ9Y689 179 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 B4DGG1 531 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 ELFN1P0C7U0 828 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 RGS19P49795 217 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CHST13Q8NET6 341 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 TPRKBQ9Y3C4 175 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 MAGEA11P43364 429 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CDCA5Q96FF9 252 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 COX4I2Q96KJ9 171 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 TMEM68Q96MH6 324 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 OR51V1Q9H2C8 321 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 CKLFQ9UBR5 152 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 POU2F3Q9UKI9 436 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 MYOCOSA0A1B0GUC4 107 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 TNFAIP8O95379 198 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 ECHS1P30084 290 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 GRTP1Q5TC63 336 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 GPR107Q5VW38 600 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 ACTRT2Q8TDY3 377 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 EPYCQ99645 322 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 NYAP2Q9P242 653 aa16.39■□□□□ 0.21
CACNA1A-238ENST00000637276 OR1I1O60431 355 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 RARGP13631 454 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 TTKP33981 857 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 RENBPP51606 427 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 MAD2L1Q13257 205 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 TDRPQ86YL5 185 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 HID1Q8IV36 788 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 NLGN4YQ8NFZ3 816 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 UGT2B28Q9BY64 529 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 SHOX2O60902 331 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 KERAO60938 352 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 POLR2LP62875 67 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 NFIAQ12857 509 aa16.38■□□□□ 0.21
CACNA1A-238ENST00000637276 WSCD1Q658N2 575 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms