RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LBRQ14739 615 aaKnown RBP11.19□□□□□ -0.62
TARDBP-221ENST00000619555 ACOX1Q15067 660 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 KIAA1614Q5VZ46 1190 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 OGFOD3Q6PK18 319 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 RAB11FIP2Q7L804 512 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 ZNF605Q86T29 641 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 PSTKQ8IV42 348 aaKnown RBP11.19□□□□□ -0.62
TARDBP-221ENST00000619555 PGBD5Q8N414 524 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 CCL4L1Q8NHW4 92 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 FNIP1Q8TF40 1166 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 TTC9Q92623 222 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 ZNF653Q96CK0 615 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 CCDC97Q96F63 343 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-221ENST00000619555 LIN37Q96GY3 246 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-221ENST00000619555 PSKH2Q96QS6 385 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 SEMA4CQ9C0C4 833 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 TMEM168Q9H0V1 697 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 THAP2Q9H0W7 228 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 CYP4F12Q9HCS2 524 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 WDR70Q9NW82 654 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 MYO1AQ9UBC5 1043 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 SEPT3Q9UH03 358 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 MOSPD1Q9UJG1 213 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 ATXN7L1Q9ULK2 861 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-221ENST00000619555 PCDHGC4Q9Y5F7 938 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 SCN8AQ9UQD0 1980 aa11.19□□□□□ -0.62
TARDBP-221ENST00000619555 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SSU72P8A0A1W2PR75 194 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 TNFRSF10CO14798 259 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 PEX11BO96011 259 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 HOXC4P09017 264 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 KELP23276 732 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SLC5A2P31639 672 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 RENBPP51606 427 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 AP1S1P61966 158 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 LY6DQ14210 128 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 PTPRRQ15256 657 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 CNGA3Q16281 694 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SMTNL2Q2TAL5 461 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 DENND2CQ68D51 928 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 PNCKQ6P2M8 343 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 ALKBH5Q6P6C2 394 aaKnown RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 JAMLQ86YT9 394 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 CCNJLQ8IV13 435 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 OR6C4Q8NGE1 309 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 PDCD6IPQ8WUM4 868 aaKnown RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SNRNP27Q8WVK2 155 aaKnown RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 WBP1Q96G27 269 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 COQ10AQ96MF6 247 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 PACSIN1Q9BY11 444 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 WDR26Q9H7D7 661 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-221ENST00000619555 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 RNF215Q9Y6U7 377 aa11.18□□□□□ -0.62
TARDBP-221ENST00000619555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 B4DGG1 531 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 H3BRJ5 948 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TMX2-CTNND1H3BSU7 103 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 K7ENP7 123 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 EFSO43281 561 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 HTRA2O43464 458 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 FUCA1P04066 466 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TPM1P09493 284 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 GLB1P16278 677 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 CR2P20023 1033 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 CCKBRP32239 447 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 VIPR1P32241 457 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 PCK1P35558 622 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 ZNF135P52742 658 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 MAXP61244 160 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TRAF2Q12933 501 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 EIF3IQ13347 325 aaKnown RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 ZNF235Q14590 738 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TGIF1Q15583 401 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 DPYSL2Q16555 572 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 C14orf28Q4W4Y0 310 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 CCDC122Q5T0U0 273 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 CCDC81Q6ZN84 652 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TMPRSS9Q7Z410 1059 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 HSD11B1LQ7Z5J1 315 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 POLNQ7Z5Q5 900 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 LZTR1Q8N653 840 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
TARDBP-221ENST00000619555 HSPH1Q92598 858 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 NUS1Q96E22 293 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 TMEM74Q96NL1 305 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 ZNF599Q96NL3 588 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 ZWILCHQ9H900 591 aa11.17□□□□□ -0.62
TARDBP-221ENST00000619555 NHEJ1Q9H9Q4 299 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms