RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
VPS45-213ENST00000618148 IER2Q9BTL4 223 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 TMEM109Q9BVC6 243 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 CHRDQ9H2X0 955 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 TBC1D17Q9HA65 648 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 PCDH12Q9NPG4 1184 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS45-213ENST00000618148 IL17CQ9P0M4 197 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 FBXL21Q9UKT6 434 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 SCML1Q9UN30 329 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 NDRG2Q9UN36 371 aaKnown RBP7.49□□□□□ -1.21
VPS45-213ENST00000618148 ZNF711Q9Y462 761 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 MTF2Q9Y483 593 aaPredicted RBP7.49□□□□□ -1.21
VPS45-213ENST00000618148 MAD1L1Q9Y6D9 718 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 RPS6KL1Q9Y6S9 549 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 SCN8AQ9UQD0 1980 aa7.49□□□□□ -1.21
VPS45-213ENST00000618148 ZNF106Q9H2Y7 1883 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 A0A087WUV0 522 aaPredicted RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 FAM159BA6NKW6 160 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 C2orf81A6NN90 581 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 PSMD11O00231 422 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 KPNA3O00505 521 aaPredicted RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 AURKAO14965 403 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 SLC7A4O43246 635 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ATP8B1O43520 1251 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 RNASEH1O60930 286 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 ACSL3O95573 720 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 CRTAMO95727 393 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 IL1BP01584 269 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 IGLV3-19P01714 112 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ALPIP09923 528 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 PIRTP0C851 137 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ADRB3P13945 408 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 LPOP22079 712 aaPredicted RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 NMBRP28336 390 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 SSTR1P30872 391 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 STX2P32856 288 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 PHBP35232 272 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 P2RY2P41231 377 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ABL2P42684 1182 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 WASP42768 502 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 NEK3P51956 506 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 DGKEP52429 567 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 STC1P52823 247 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 EPHB1P54762 984 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 RASA2Q15283 850 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 SKIDA1Q1XH10 827 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 CFAP58Q5T655 872 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 AGBL4Q5VU57 503 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ALS2CLQ60I27 953 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 DENND2CQ68D51 928 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 CASC4Q6P4E1 433 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 TRMT10BQ6PF06 316 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 CRTC1Q6UUV9 634 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 LRIG3Q6UXM1 1119 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 C3orf62Q6ZUJ4 267 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 USP30Q70CQ3 517 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ERN2Q76MJ5 926 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 HDXQ7Z353 690 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 GLT6D1Q7Z4J2 308 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 MMAAQ8IVH4 418 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 CNTN4Q8IWV2 1026 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 AADATQ8N5Z0 425 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
VPS45-213ENST00000618148 BLOC1S5Q8TDH9 187 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 STYXQ8WUJ0 223 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 PKNOX2Q96KN3 472 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 MRGPRX1Q96LB2 322 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 DHRS4Q9BTZ2 278 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 FOXQ1Q9C009 403 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 PPCSQ9HAB8 311 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 LMAN1LQ9HAT1 526 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 NLE1Q9NVX2 485 aaPredicted RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 EURLQ9NYK6 297 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 B4GALT6Q9UBX8 382 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 ARL5AQ9Y689 179 aa7.48□□□□□ -1.21
VPS45-213ENST00000618148 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.48□□□□□ -1.21
VPS45-213ENST00000618148 C1orf232A0A0U1RR37 186 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 RGSL1A5PLK6 1076 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 FAM170BA6NMN3 283 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 MID1O15344 667 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 ATG13O75143 517 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 SASH3O75995 380 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 CYP2A6P11509 494 aaPredicted RBP7.47□□□□□ -1.21
VPS45-213ENST00000618148 CTPS1P17812 591 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 PAMP19021 973 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 VIPR1P32241 457 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 MAGEA9P43362 315 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 PSMD8P48556 350 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 ARSDP51689 593 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 EIF3BP55884 814 aaKnown RBP7.47□□□□□ -1.21
VPS45-213ENST00000618148 TAS2R38P59533 333 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 DCDC1P59894 354 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 SIGLEC14Q08ET2 396 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 ELP6Q0PNE2 266 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 CNTN1Q12860 1018 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 NAB1Q13506 487 aa7.47□□□□□ -1.21
VPS45-213ENST00000618148 STAT4Q14765 748 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms