RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CSNK1DP48730 415 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 LIG3P49916 1009 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 CDH6P55285 790 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 CCL7P80098 99 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 DPYSQ14117 519 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 LY6DQ14210 128 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 PDK2Q15119 407 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 TMCO3Q6UWJ1 677 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 B3GNT8Q7Z7M8 397 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 TXLNBQ8N3L3 684 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 FBXO39Q8N4B4 442 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 SPC24Q8NBT2 197 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 GPR156Q8NFN8 814 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 MED8Q96G25 268 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 CALR3Q96L12 384 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 WDR92Q96MX6 357 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 GFM1Q96RP9 751 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 CCNL2Q96S94 520 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 BAG1Q99933 345 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 STRADBQ9C0K7 418 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 PCDH18Q9HCL0 1135 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 ATXN7L1Q9ULK2 861 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 ATP8A1Q9Y2Q0 1164 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 OR1A2Q9Y585 309 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 ATMQ13315 3056 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 J3KR12 359 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 BUB1BO60566 1050 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 TNFP01375 233 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 RPLP0P05388 317 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 SERPINB6P35237 376 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 UGT1A5P35504 534 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 INHBCP55103 352 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 CFAP58Q5T655 872 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 OGFOD3Q6PK18 319 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 RAB11FIP2Q7L804 512 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 RD3Q7Z3Z2 195 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 ZSWIM9Q86XI8 627 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 CAMK1DQ8IU85 385 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 TMEM74Q96NL1 305 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 CSPG4P5Q96PW8 444 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 LRRN3Q9H3W5 708 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 APPL1Q9UKG1 709 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 CFAP46Q8IYW2 2715 aa17.61■□□□□ 0.41
SHKBP1-203ENST00000594298 A0A0A6YYK5 440 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 PCCBP05166 539 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 HOXC4P09017 264 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 PNLIPP16233 465 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 AMPD1P23109 780 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 SLC5A2P31639 672 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 GJC1P36383 396 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 GSDMDP57764 484 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 KIAA1024LP59773 190 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 KIAA1614Q5VZ46 1190 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 TXNRD3NBQ6F5E7 133 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 NYAP1Q6ZVC0 841 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 FAM71BQ8TC56 605 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 TMEM159Q96B96 161 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 ECHDC3Q96DC8 303 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 PDXPQ96GD0 296 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 CELF6Q96J87 481 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 SLC39A8Q9C0K1 460 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 ATP13A3Q9H7F0 1226 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 ZNF462Q96JM2 2506 aa17.6■□□□□ 0.41
SHKBP1-203ENST00000594298 DFFAO00273 331 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 TNFRSF10CO14798 259 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 EFSO43281 561 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 GLB1P16278 677 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 SERPINA4P29622 427 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 RGRP47804 291 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 ZFP36L1Q07352 338 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 RALGDSQ12967 914 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 CERCAMQ5T4B2 595 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 LRRC38Q5VT99 294 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 KCTD16Q68DU8 428 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 SRLQ86TD4 932 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 CCNJLQ8IV13 435 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 PLA2G15Q8NCC3 412 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 OR56A4Q8NGH8 313 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 ZNF670Q9BS34 389 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 FOXP3Q9BZS1 431 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 SP110Q9HB58 689 aa17.59■□□□□ 0.41
SHKBP1-203ENST00000594298 TMEM202A6NGA9 273 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 CACNB4O00305 520 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 NVLO15381 856 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 SPOPO43791 374 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 NOBOXO60393 691 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 RECQL5O94762 991 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 KELP23276 732 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 TRIM23P36406 574 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 TAS2R40P59535 323 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 IL10RBQ08334 325 aa17.58■□□□□ 0.4
SHKBP1-203ENST00000594298 NSUN2Q08J23 767 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms