RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NUDCD3Q8IVD9 361 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CPA6Q8N4T0 437 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 GPATCH11Q8N954 259 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CCDC197Q8NCU1 140 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 FAM45AQ8TCE6 357 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM1-215ENST00000558868 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 SUV39H2Q9H5I1 410 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 FBXO6Q9NRD1 293 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.8□□□□□ -0.2
TPM1-215ENST00000558868 DEC1Q9P2X7 70 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
TPM1-215ENST00000558868 A0A1W2PPC1 479 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CAPN8A6NHC0 703 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 BUD23O43709 281 aaKnown RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 PLIN3O60664 434 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 PIGNO95427 931 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 S1PR4O95977 384 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 BPGMP07738 259 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 DLDP09622 509 aaKnown RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 HMGCLP35914 325 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 MTHFRP42898 656 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CSRP3P50461 194 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CCNHP51946 323 aaPredicted RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 PTPN5P54829 565 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 ITIH4Q14624 930 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 ZKSCAN8Q15776 578 aaPredicted RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 TYSND1Q2T9J0 566 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 PPM1JQ5JR12 505 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CNSTQ6PJW8 725 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 USP45Q70EL2 814 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CLEC14AQ86T13 490 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 SLC41A1Q8IVJ1 513 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 OR6K2Q8NGY2 324 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 ECHDC3Q96DC8 303 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 LRIG1Q96JA1 1093 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 TTC1Q99614 292 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 ELAC2Q9BQ52 826 aaKnown RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 FAM83CQ9BQN1 747 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 HEPHQ9BQS7 1158 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CIPCQ9C0C6 399 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 CAB39LQ9H9S4 337 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
TPM1-215ENST00000558868 SIRPGQ9P1W8 387 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 PPIL1Q9Y3C6 166 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 STARD13Q9Y3M8 1113 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 ANKRD36A6QL64 1941 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 C2orf16Q68DN1 1984 aa13.79□□□□□ -0.2
TPM1-215ENST00000558868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 AURKAO14965 403 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 LINC01565O15544 149 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 SNX3O60493 162 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 TULP3O75386 442 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 NDUFS3O75489 264 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 IL1BP01584 269 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 PROCP04070 461 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 ARSAP15289 507 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 CTPS1P17812 591 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 SAT1P21673 171 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 FCARP24071 287 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 SLC26A3P40879 764 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 ABCG1P45844 678 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 TTPAP49638 278 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 STC1P52823 247 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 PRKAA2P54646 552 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 E2F5Q15329 346 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 HECTD2Q5U5R9 776 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 BRAT1Q6PJG6 821 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 GDPD4Q6W3E5 623 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 SPATA21Q7Z572 469 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 TBC1D1Q86TI0 1168 aaPredicted RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 ETFBKMTQ8IXQ9 262 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 PPP1R14CQ8TAE6 165 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 ELSPBP1Q96BH3 223 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 MRGPRX3Q96LB0 322 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 LYSMD1Q96S90 227 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 OMDQ99983 421 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 CCDC68Q9H2F9 335 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 C12orf65Q9H3J6 166 aaKnown RBP13.78□□□□□ -0.2
TPM1-215ENST00000558868 EBF3Q9H4W6 596 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
TPM1-215ENST00000558868 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms