RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GRAMD1BQ3KR37 738 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 METTL25Q8N6Q8 603 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 ZFP28Q8NHY6 868 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 WBP2Q969T9 261 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 GLT1D1Q96MS3 346 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 KCNA7Q96RP8 456 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 MRPL57Q9BQC6 102 aaKnown RBP14.8□□□□□ -0.04
DDX55-209ENST00000542286 ZBED2Q9BTP6 218 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 VPS45Q9NRW7 570 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 TMEM248Q9NWD8 314 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 NSMCE4AQ9NXX6 385 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 ZNF232Q9UNY5 417 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 CCDC162PA2VCL2 907 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 RGSL1A5PLK6 1076 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 MAGEB3O15480 346 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 NBNO60934 754 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 SUPT7LO94864 414 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 S1PR4O95977 384 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 IRF1P10914 325 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 MYL4P12829 197 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ZNF33AQ06730 810 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 CUZD1Q86UP6 607 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ABI1Q8IZP0 508 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 CEP70Q8NHQ1 597 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 GAB3Q8WWW8 586 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 C3orf30Q96M34 536 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 RTKNQ9BST9 563 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TRIM8Q9BZR9 551 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 PCDHAC1Q9H158 963 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 FAM96AQ9H5X1 160 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 MARCH5Q9NX47 278 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 FAM50BQ9Y247 325 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 LZTS1Q9Y250 596 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 VWA7Q9Y334 891 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 CAPN8A6NHC0 703 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ATP6V1B1P15313 513 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ATF6P18850 670 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 FOXA1P55317 472 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 SREBF2Q12772 1141 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 GPNMBQ14956 572 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TLR1Q15399 786 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 C16orf59Q7L2K0 433 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 BEND5Q7L4P6 421 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TMCO2Q7Z6W1 182 aaPredicted RBP14.79□□□□□ -0.04
DDX55-209ENST00000542286 KYQ8NBH2 561 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 CD99L2Q8TCZ2 262 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ESAMQ96AP7 390 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TRIM62Q9BVG3 475 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 GRIP2Q9C0E4 1043 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TRPC7Q9HCX4 862 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ATP13A1Q9HD20 1204 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.79□□□□□ -0.04
DDX55-209ENST00000542286 IKZF3Q9UKT9 509 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 SPO11Q9Y5K1 396 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TCAF2A6NFQ2 919 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 H3BMM5 538 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 APOA4P06727 396 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ATP5F1P24539 256 aaPredicted RBP14.79□□□□□ -0.04
DDX55-209ENST00000542286 SOX11P35716 441 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 EMP3P54852 163 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 TIAL1Q01085 375 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX55-209ENST00000542286 POU4F1Q01851 419 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 NFE2Q16621 373 aaPredicted RBP14.79□□□□□ -0.04
DDX55-209ENST00000542286 FAM83EQ2M2I3 478 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 LINGO4Q6UY18 593 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 RNF180Q86T96 592 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 ZNF554Q86TJ5 538 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 DCBLD1Q8N8Z6 715 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 SCLYQ96I15 445 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 BTN2A3PQ96KV6 586 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 BTBD9Q96Q07 612 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 FBXO44Q9H4M3 255 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 GALPQ9UBC7 116 aa14.79□□□□□ -0.04
DDX55-209ENST00000542286 UBA6A0AVT1 1052 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 NCF1BA6NI72 391 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 NCF1CA8MVU1 366 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 UBXN8O00124 270 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 DNAJA2O60884 412 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ATP5BP06576 529 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 THRAP10827 490 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 NCF1P14598 390 aaPredicted RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 LEPRP48357 1165 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 YBX1P67809 324 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 ECT2LQ008S8 904 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 CBX3Q13185 183 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 SERINC3Q13530 473 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 DCTN2Q13561 401 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 ZNF235Q14590 738 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 CYHR1Q6ZMK1 362 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 PCSK9Q8NBP7 692 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 RDH11Q8TC12 318 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 SPPL2BQ8TCT7 592 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 PDCD6IPQ8WUM4 868 aaKnown RBP14.78□□□□□ -0.04
DDX55-209ENST00000542286 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ZNF385DQ9H6B1 395 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 WDR41Q9HAD4 459 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 ZBTB26Q9HCK0 441 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 BPIFA1Q9NP55 256 aa14.78□□□□□ -0.04
DDX55-209ENST00000542286 TIMMDC1Q9NPL8 285 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms