RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 C1SP09871 688 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 MAOBP27338 520 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 AKT2P31751 481 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 PTGER3P43115 390 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 MAGEA6P43360 314 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 RPL21P46778 160 aaKnown RBP14.97□□□□□ -0.01
NUP54-213ENST00000513352 ITGA8P53708 1063 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 CALCOCO2Q13137 446 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 TMEM259Q4ZIN3 620 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 WDR45BQ5MNZ6 344 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 CERCAMQ5T4B2 595 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 HSD11B1LQ7Z5J1 315 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 LRRN4CLQ8ND94 238 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 NUS1Q96E22 293 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 SERAC1Q96JX3 654 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 LYSMD1Q96S90 227 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 SLC17A9Q9BYT1 436 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 ARNT2Q9HBZ2 717 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 BPIFA1Q9NP55 256 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 CASS4Q9NQ75 786 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 AASDHPPTQ9NRN7 309 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.97□□□□□ -0.01
NUP54-213ENST00000513352 PKD2L2Q9NZM6 624 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
NUP54-213ENST00000513352 CD84Q9UIB8 345 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 SMG5Q9UPR3 1016 aaKnown RBP14.97□□□□□ -0.01
NUP54-213ENST00000513352 ARL5AQ9Y689 179 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 PLXNA2O75051 1894 aa14.97□□□□□ -0.01
NUP54-213ENST00000513352 C2orf81A6NN90 581 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 AP3B1O00203 1094 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 NDC80O14777 642 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 WNT9AO14904 365 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 AURKAO14965 403 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 SEC31AO94979 1220 aaKnown RBP14.96□□□□□ -0.01
NUP54-213ENST00000513352 CRTAMO95727 393 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 PCCBP05166 539 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 HNRNPA2B1P22626 353 aaKnown RBP14.96□□□□□ -0.01
NUP54-213ENST00000513352 ITPKAP23677 461 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 IVDP26440 423 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 ETV3P41162 512 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 STC1P52823 247 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 GUCY2DQ02846 1103 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 CREB5Q02930 508 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 FGL2Q14314 439 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 MORF4L2Q15014 288 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 ALS2CLQ60I27 953 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 CASC4Q6P4E1 433 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 LRRC8BQ6P9F7 803 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 Q6ZVL8 140 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 HOOK3Q86VS8 718 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 NAT8LQ8N9F0 302 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 BBOF1Q8ND07 529 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
NUP54-213ENST00000513352 PIGKQ92643 395 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 COQ10AQ96MF6 247 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 C1QTNF2Q9BXJ5 285 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 EPC1Q9H2F5 836 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 XAB2Q9HCS7 855 aaKnown RBP14.96□□□□□ -0.01
NUP54-213ENST00000513352 BFARQ9NZS9 450 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 PKP3Q9Y446 797 aa14.96□□□□□ -0.01
NUP54-213ENST00000513352 WDFY4Q6ZS81 3184 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 A0A1W2PPC4 97 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 PSMD11O00231 422 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 STX7O15400 261 aaKnown RBP14.95□□□□□ -0.02
NUP54-213ENST00000513352 LATO43561 262 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 RHOXF2BP0C7M4 288 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 MGAT1P26572 445 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 CD27P26842 260 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 NUDT1P36639 197 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 CRADDP78560 199 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 PTSQ03393 145 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 LRRC14Q15048 493 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 TAF1AQ15573 450 aaPredicted RBP14.95□□□□□ -0.02
NUP54-213ENST00000513352 CDKN3Q16667 212 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 GLE1Q53GS7 698 aaKnown RBP14.95□□□□□ -0.02
NUP54-213ENST00000513352 SPDYCQ5MJ68 293 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 DUPD1Q68J44 220 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 RFLNAQ6ZTI6 216 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 TMC3Q7Z5M5 1100 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 TTC30BQ8N4P2 665 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 ZCCHC9Q8N567 271 aaKnown RBP14.95□□□□□ -0.02
NUP54-213ENST00000513352 MCUQ8NE86 351 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 BRSK1Q8TDC3 778 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 DTD2Q96FN9 168 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 ZC3H10Q96K80 434 aaKnown RBP14.95□□□□□ -0.02
NUP54-213ENST00000513352 RHOXF2Q9BQY4 288 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 SAMD15Q9P1V8 674 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 DMTF1Q9Y222 760 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 CA5BQ9Y2D0 317 aa14.95□□□□□ -0.02
NUP54-213ENST00000513352 SCN8AQ9UQD0 1980 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 TNRC6BQ9UPQ9 1833 aaKnown RBP14.94□□□□□ -0.02
NUP54-213ENST00000513352 MUC6Q6W4X9 2439 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 ESYT3A0FGR9 886 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 HEATR9A2RTY3 570 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 PRAMEF26H0Y7S4 382 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 RAD51BO15315 384 aa14.94□□□□□ -0.02
NUP54-213ENST00000513352 AVILO75366 819 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms