RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SPATA6LQ8N4H0 392 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ZNF513Q8N8E2 541 aaPredicted RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 LRRC58Q96CX6 371 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 PIRO00625 290 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 UBFD1O14562 309 aaKnown RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 WISP3O95389 354 aaPredicted RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 LDLRP01130 860 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 JCHAINP01591 159 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 INSRRP14616 1297 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ARSAP15289 507 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 GRIK2Q13002 908 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ZNF846Q147U1 533 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 NEDD8Q15843 81 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ARL13BQ3SXY8 428 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 AASDHQ4L235 1098 aaPredicted RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 FBXO47Q5MNV8 452 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 RBM48Q5RL73 367 aaKnown RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 SYPL2Q5VXT5 272 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 SNX31Q8N9S9 440 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 CALML6Q8TD86 181 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 CYP4F12Q9HCS2 524 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 SDR39U1Q9NRG7 319 aaPredicted RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 ANAPC2Q9UJX6 822 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 TRIM17Q9Y577 477 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 NRCAMQ92823 1304 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 MYLKQ15746 1914 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 NR5A2O00482 541 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 HCRTO43612 131 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 EIF2S1P05198 315 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 NPR3P17342 541 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 CAPN3P20807 821 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 LMO2P25791 158 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 GSTM2P28161 218 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 ADRA1AP35348 466 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 PNPLA4P41247 253 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 LEPRP48357 1165 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 TMED10P49755 219 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 ZNF678Q5SXM1 525 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 XAF1Q6GPH4 301 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 GALNT18Q6P9A2 607 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 TFAP2DQ7Z6R9 452 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 IGFN1Q86VF2 1251 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 PHYKPLQ8IUZ5 450 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 DCP1BQ8IZD4 617 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 OFCC1Q8IZS5 231 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 SNX19Q92543 992 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 NDRG1Q92597 394 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 GLT1D1Q96MS3 346 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 RDH12Q96NR8 316 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 MTG1Q9BT17 334 aaPredicted RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 AKTIPQ9H8T0 292 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 SLC52A3Q9NQ40 469 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 ENTPD7Q9NQZ7 604 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 HACL1Q9UJ83 578 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 UBQLN1Q9UMX0 589 aaKnown RBP17.77■□□□□ 0.44
NUP54-205ENST00000507257 AKT3Q9Y243 479 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 TLL2Q9Y6L7 1015 aa17.77■□□□□ 0.44
NUP54-205ENST00000507257 CLIC3O95833 236 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 EGFRP00533 1210 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 CD4P01730 458 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 CCNCP24863 283 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 AXLP30530 894 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 EEFSECP57772 596 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 CRY1Q16526 586 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 CYP51A1Q16850 503 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 KIF19Q2TAC6 998 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 ZNF470Q6ECI4 717 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 USP33Q8TEY7 942 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 TMEM125Q96AQ2 219 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 LRCH3Q96II8 777 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 CCDC138Q96M89 665 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 BCL7BQ9BQE9 202 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 RAD21L1Q9H4I0 556 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 EGFL7Q9UHF1 273 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 GPC6Q9Y625 555 aaPredicted RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 CPQQ9Y646 472 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 ZFC3H1O60293 1989 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 SYNJ2BP-COX16A0A087WUM0 186 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 CLDN25C9JDP6 229 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 I6L893 689 aaPredicted RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 J3QRK9 145 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 ALBP02768 609 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 FYNP06241 537 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 ALOX5P09917 674 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 POLR2IP36954 125 aaKnown RBP17.76■□□□□ 0.43
NUP54-205ENST00000507257 RXRGP48443 463 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 GEMP55040 296 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 GABARAPL2P60520 117 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 POU6F1Q14863 301 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 TRIM16LQ309B1 348 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 NEPROQ6NW34 567 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 TMEM53Q6P2H8 277 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 BLOC1S3Q6QNY0 202 aa17.76■□□□□ 0.43
NUP54-205ENST00000507257 ALKAL1Q6UXT8 129 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms