RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LMNTD1Q8N9Z9 388 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 IL17RCQ8NAC3 791 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 LNX1Q8TBB1 728 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC20A1Q8WUM9 679 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 KIF1BPQ96EK5 621 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 APOPT1Q96IL0 206 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 TTC14Q96N46 770 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 PLEKHA4Q9H4M7 779 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 GPR108Q9NPR9 543 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 ADAM18Q9Y3Q7 739 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 CGNL1Q0VF96 1302 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 SOCS5O75159 536 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 CDH1P12830 882 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 COX7A2P14406 83 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 MAOAP21397 527 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 MAPK9P45984 424 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 ECT2LQ008S8 904 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 GPR68Q15743 365 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 ALG11Q2TAA5 492 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 COL28A1Q2UY09 1125 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 KRTAP27-1Q3LI81 207 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 OTUD3Q5T2D3 398 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC9C2Q5TAH2 1124 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 CPLX2Q6PUV4 134 aaKnown RBP3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 GFRALQ6UXV0 394 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 TAOK1Q7L7X3 1001 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 RRM2BQ7LG56 351 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 DSG4Q86SJ6 1040 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 HAPLN4Q86UW8 402 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 TMEM219Q86XT9 240 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 DCUN1D3Q8IWE4 304 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZNF34Q8IZ26 560 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 HTRA1Q92743 480 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 KLHL29Q96CT2 875 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 HVCN1Q96D96 273 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 EPYCQ99645 322 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 CMKLR1Q99788 373 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC25A18Q9H1K4 315 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 PPP1R3EQ9H7J1 279 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 MMP25Q9NPA2 562 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 RALYQ9UKM9 306 aaKnown RBP3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 A4GNTQ9UNA3 340 aa3.37□□□□□ -1.87
HMGB1P29-201ENST00000505659 ERVV-2B6SEH9 535 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 NCAM2O15394 837 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 SEC14L5O43304 696 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TIPRLO75663 272 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 FTCDO95954 541 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 CRYAAP02489 173 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 PYGLP06737 847 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 MARK3P27448 753 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TMPOP42166 694 aaKnown RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TLE2Q04725 743 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TROAPQ12815 778 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 BIRC3Q13489 604 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TRPC3Q13507 836 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 CAMK1Q14012 370 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 DHX8Q14562 1220 aaKnown RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 KIF26BQ2KJY2 2108 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 STXBP5Q5T5C0 1151 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 GSG1LQ6UXU4 331 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 GDPD4Q6W3E5 623 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 MARK2Q7KZI7 788 aaKnown RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 HEATR4Q86WZ0 1026 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 SPATA6LQ8N4H0 392 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 OR13A1Q8NGR1 328 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 HMGCLL1Q8TB92 370 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 ABTB1Q969K4 478 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 FEM1CQ96JP0 617 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 MMP28Q9H239 520 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 NDST4Q9H3R1 872 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 HINT3Q9NQE9 182 aaKnown RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZFP57Q9NU63 452 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 ERRFI1Q9UJM3 462 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 SCINQ9Y6U3 715 aa3.36□□□□□ -1.87
HMGB1P29-201ENST00000505659 A0A1W2PQM1 296 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 P2RY10O00398 339 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 HOXC11O43248 304 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 MYOD1P15172 320 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 S1PR1P21453 382 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 BDKRB2P30411 391 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 CORO1AP31146 461 aaKnown RBP3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 GNAQP50148 359 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 METAP2P50579 478 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 TUBP50607 506 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 CLCNKAP51800 687 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 HNRNPH2P55795 449 aaKnown RBP3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 NAE1Q13564 534 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 PRICKLE4Q2TBC4 344 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 KCNT1Q5JUK3 1230 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 FAM69AQ5T7M9 428 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZNF280DQ6N043 979 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZNF449Q6P9G9 518 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 KRBA2Q6ZNG9 492 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 WDR63Q8IWG1 891 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 MYRIPQ8NFW9 859 aa3.35□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZCCHC10Q8TBK6 192 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms