RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SIN3AQ96ST3 1273 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 ACOX2Q99424 681 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 SRSF8Q9BRL6 282 aaKnown RBP2.34□□□□□ -2.03
ITGB1-213ENST00000484088 PDCL3Q9H2J4 239 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 RANGRFQ9HD47 186 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-213ENST00000484088 TMEM51Q9NW97 253 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 MTMR10Q9NXD2 777 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 NSMCE4AQ9NXX6 385 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 CISD1Q9NZ45 108 aaKnown RBP2.34□□□□□ -2.03
ITGB1-213ENST00000484088 CLIC5Q9NZA1 410 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 EHD2Q9NZN4 543 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 TINAGQ9UJW2 476 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 FBXO2Q9UK22 296 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-213ENST00000484088 VPS28Q9UK41 221 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 PADI1Q9ULC6 663 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 INSL5Q9Y5Q6 135 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 RPS6KL1Q9Y6S9 549 aa2.34□□□□□ -2.03
ITGB1-213ENST00000484088 hCG_1807616A0A1W2PRN6 198 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 DYTNA2CJ06 578 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TYW5A2RUC4 315 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PTGES3LE9PB15 166 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 MS4A18H0YCH9 400 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 VCYO14598 125 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 IKBKBO14920 756 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SCAMP1O15126 338 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NDUFS7O75251 213 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NDUFB4O95168 129 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 VNN2O95498 520 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TMEM191BP0C7N4 346 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CSH1P0DML2 217 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CSH2P0DML3 217 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SELLP14151 372 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NFKBIAP25963 317 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 HOXA11P31270 313 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 HOXA13P31271 388 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ACTN2P35609 894 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ARL3P36405 182 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 RAD52P43351 418 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 KRTAP10-7P60409 375 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PPATQ06203 517 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NAE1Q13564 534 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CUL4AQ13619 759 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 RUNX2Q13950 521 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 GPR18Q14330 331 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ARHGEF6Q15052 776 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 EIF2S3LQ2VIR3 472 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PRTGQ2VWP7 1150 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF260Q3ZCT1 412 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 RAB41Q5JT25 222 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PAPPA-AS1Q5QFB9 102 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PXDC1Q5TGL8 231 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 WDR78Q5VTH9 848 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TMEM198Q66K66 360 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 KLHL24Q6TFL4 600 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 B3GNT6Q6ZMB0 384 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 COLCA1Q6ZS62 124 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 Q6ZTK2 550 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CHST9Q7L1S5 443 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TRAPPC11Q7Z392 1133 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 GALNT5Q7Z7M9 940 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TICAM2Q86XR7 235 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SCML4Q8N228 414 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SPATA6LQ8N4H0 392 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TMEM199Q8N511 208 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ZCCHC9Q8N567 271 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 RBMXL3Q8N7X1 1067 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 AGBL3Q8NEM8 1001 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 OR2AK2Q8NG84 335 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 OR14L1PQ8NHC6 308 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TRPC4APQ8TEL6 797 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SCFD2Q8WU76 684 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 TRIB2Q92519 343 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 LPAR1Q92633 364 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ELMOD3Q96FG2 381 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NLRP4Q96MN2 994 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CMTM3Q96MX0 182 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 NEUROD6Q96NK8 337 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SEPT5Q99719 369 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SDF4Q9BRK5 362 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 HINT3Q9NQE9 182 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 EIF2B3Q9NR50 452 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PAG1Q9NWQ8 432 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 OR6C3Q9NZP0 311 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 DLGAP2Q9P1A6 1054 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SUCLA2Q9P2R7 463 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 SLC9A2Q9UBY0 812 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ADD3Q9UEY8 706 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 FBXL17Q9UF56 701 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 ZNF580Q9UK33 172 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 AGO1Q9UL18 857 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PADI3Q9ULW8 664 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 AAR2Q9Y312 384 aaKnown RBP2.33□□□□□ -2.04
ITGB1-213ENST00000484088 PTGDR2Q9Y5Y4 395 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 CLIC4Q9Y696 253 aa2.33□□□□□ -2.04
ITGB1-213ENST00000484088 A0A1W2PQ09 198 aa2.32□□□□□ -2.04
ITGB1-213ENST00000484088 C1orf226A1L170 272 aa2.32□□□□□ -2.04
ITGB1-213ENST00000484088 KDM4EB2RXH2 506 aaPredicted RBP2.32□□□□□ -2.04
ITGB1-213ENST00000484088 B4DGG1 531 aa2.32□□□□□ -2.04
ITGB1-213ENST00000484088 ENTPD3O75355 529 aa2.32□□□□□ -2.04
ITGB1-213ENST00000484088 TIPRLO75663 272 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms