RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GARTP22102 1010 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CFPP27918 469 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ABCD1P33897 745 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 GFERP55789 205 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 NUCB2P80303 420 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 NRG1Q02297 640 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ILF3Q12906 894 aaKnown RBP eCLIP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 HDAC1Q13547 482 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 WSCD2Q2TBF2 565 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 TTC22Q5TAA0 569 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 KRT79Q5XKE5 535 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 SPOCD1Q6ZMY3 1216 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 RAB43Q86YS6 212 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 HIPK1Q86Z02 1210 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CRYBG2Q8N1P7 616 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 MCUQ8NE86 351 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CATSPER1Q8NEC5 780 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CXorf40AQ8TE69 158 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 SHC3Q92529 594 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 RAB7BQ96AH8 199 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CYFIP2Q96F07 1278 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 MAGED4Q96JG8 741 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 PLIN2Q99541 437 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 WRAP53Q9BUR4 548 aaKnown RBP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 GSDMCQ9BYG8 508 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 UCK2Q9BZX2 261 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 CHST8Q9H2A9 424 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 KCND2Q9NZV8 630 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ODF2LQ9ULJ1 636 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 COQ6Q9Y2Z9 468 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 HS3ST4Q9Y661 456 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 C16orf96A6NNT2 1141 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CACNB4O00305 520 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 STX6O43752 255 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 PRAMEF2O60811 474 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 MOCS2O96007 188 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 IGLV3-27P01718 113 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 UNGP13051 313 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 BMP7P18075 431 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 POLD2P49005 469 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 TBX4P57082 545 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 DCAF7P61962 342 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 DMTNQ08495 405 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 KCNA1Q09470 495 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 NFATC2Q13469 925 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 TRPC3Q13507 836 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 BSPRYQ5W0U4 402 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 RAP1GAP2Q684P5 730 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 LCN10Q6JVE6 187 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CXorf57Q6NSI4 855 aaKnown RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 C3P1Q6ZMU1 363 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 MRGPREQ86SM8 312 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CCAR2Q8N163 923 aaKnown RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CPSF7Q8N684 471 aaKnown RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 OR1N1Q8NGS0 311 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 ALG14Q96F25 216 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 C9orf72Q96LT7 481 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CBWD1Q9BRT8 395 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 XYLT2Q9H1B5 865 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CARS2Q9HA77 564 aaKnown RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 BEX4Q9NWD9 120 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-206ENST00000471968 PPT2Q9UMR5 302 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 HS3ST2Q9Y278 367 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 CHD5Q8TDI0 1954 aa6.55□□□□□ -1.36
HDAC3-206ENST00000471968 PRSS38A1L453 326 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 SNAP91O60641 907 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 RASSF9O75901 435 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 WISP2O76076 250 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 TOXO94900 526 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ZBED1O96006 694 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 DLATP10515 647 aaKnown RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 TNNI1P19237 187 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ITIH2P19823 946 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 CHRNA4P43681 627 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 FASLGP48023 281 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 DNA2P51530 1060 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 TKTL1P51854 596 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 ZNF131P52739 623 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 KIAA1024LP59773 190 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 NUCB1Q02818 461 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 KRTAP1-1Q07627 177 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 STK3Q13188 491 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 GPS2Q13227 327 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 KRT32Q14532 448 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 TSR1Q2NL82 804 aaKnown RBP6.54□□□□□ -1.36
HDAC3-206ENST00000471968 CHRFAM7AQ494W8 412 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 PRAMEF17Q5VTA0 474 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 C22orf39Q6P5X5 142 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 IGFL2Q6UWQ7 119 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 BHLHA9Q7RTU4 235 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 CHSY1Q86X52 802 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 PLXDC1Q8IUK5 500 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 KIAA0895Q8NCT3 520 aa6.54□□□□□ -1.36
HDAC3-206ENST00000471968 OR52K2Q8NGK3 314 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms