RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PTPRRQ15256 657 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TNFAIP8L3Q5GJ75 292 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 CACTIN-AS1Q8N1I8 211 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 GLMNQ92990 594 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 NPY6RQ99463 290 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TM6SF2Q9BZW4 377 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 NOL6Q9H6R4 1146 aaKnown RBP12.38□□□□□ -0.43
USP11-206ENST00000469080 THAP1Q9NVV9 213 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 ZDHHC7Q9NXF8 308 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 AP4B1Q9Y6B7 739 aa12.38□□□□□ -0.43
USP11-206ENST00000469080 TET1Q8NFU7 2136 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 PSMD12O00232 456 aaPredicted RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 PRRG1O14668 218 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 INHAP05111 366 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 ALDH7A1P49419 539 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 UPP1Q16831 310 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 TUBA3EQ6PEY2 450 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 ZDHHC17Q8IUH5 632 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 PSTKQ8IV42 348 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 LZTR1Q8N653 840 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 TSPAN14Q8NG11 270 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 DACT3Q96B18 629 aaPredicted RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 QKIQ96PU8 341 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP11-206ENST00000469080 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 TBC1D13Q9NVG8 400 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 EBF1Q9UH73 591 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 URB1O60287 2271 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 ACSL4O60488 711 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 ABHD2P08910 425 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 CKBP12277 381 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 KCNE1P15382 129 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 THOP1P52888 689 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 GNA12Q03113 381 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 TUBA3CQ13748 450 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 BIRC8Q96P09 236 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 C17orf80Q9BSJ5 609 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 FAM96AQ9H5X1 160 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 LRRC40Q9H9A6 602 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 SNX15Q9NRS6 342 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 FAM50BQ9Y247 325 aa12.37□□□□□ -0.43
USP11-206ENST00000469080 RBBP6Q7Z6E9 1792 aaKnown RBP12.37□□□□□ -0.43
USP11-206ENST00000469080 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 RALBP11234 206 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ZNF135P52742 658 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 MAPK10P53779 464 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 MYBPC1Q00872 1141 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 BNIP3Q12983 259 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 PLD1Q13393 1074 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 TSTA3Q13630 321 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 TCHHL1Q5QJ38 904 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 C6orf52Q5T4I8 152 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 OR7D4Q8NG98 312 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ESAMQ96AP7 390 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 MUC3BQ9H195 1237 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 HMX1Q9NP08 348 aaPredicted RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 LOXHD1Q8IVV2 1947 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 AURKAO14965 403 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 SH3BP5O60239 455 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 WARSP23381 471 aaKnown RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 EPHA3P29320 983 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ESRRGP62508 458 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 RPS24P62847 133 aaKnown RBP12.36□□□□□ -0.43
USP11-206ENST00000469080 IRF5Q13568 498 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 GRM3Q14832 879 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 PGS1Q32NB8 556 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ALFQ53S48 1182 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 NAPRTQ6XQN6 538 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 PCYOX1LQ8NBM8 494 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 GDAP2Q9NXN4 497 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
USP11-206ENST00000469080 A0A0U1RQF3 1178 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms