RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 RALGPS1Q5JS13 557 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 B3GNT8Q7Z7M8 397 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 PELI3Q8N2H9 469 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 Q8N9G6 341 aaPredicted RBP21.06■□□□□ 0.96
VSX1-206ENST00000444511 IQCDQ96DY2 449 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 STRADBQ9C0K7 418 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 LRRN3Q9H3W5 708 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 DPEP2Q9H4A9 486 aa21.06■□□□□ 0.96
VSX1-206ENST00000444511 PHPT1Q9NRX4 125 aaPredicted RBP21.06■□□□□ 0.96
VSX1-206ENST00000444511 A0A087X0T9 212 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 A0A1W2PQM1 296 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 PRSS38A1L453 326 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 CDRT15L2A8MXV6 281 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 MYO1FO00160 1098 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 PLD2O14939 933 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 CYP1A2P05177 515 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 ITGA2BP08514 1039 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 FAM228BP0C875 321 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 GLB1P16278 677 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 INHBCP55103 352 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 C19orf57Q0VDD7 668 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 EIF3IQ13347 325 aaKnown RBP21.05■□□□□ 0.96
VSX1-206ENST00000444511 ARHGEF7Q14155 803 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 HADHQ16836 314 aaKnown RBP21.05■□□□□ 0.96
VSX1-206ENST00000444511 C14orf28Q4W4Y0 310 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 ARMC12Q5T9G4 340 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 ARHGAP40Q5TG30 622 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 OGFOD3Q6PK18 319 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 USP45Q70EL2 814 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 CLEC14AQ86T13 490 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 CCNJLQ8IV13 435 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 TMEM74Q96NL1 305 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 FOXP3Q9BZS1 431 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 SUDS3Q9H7L9 328 aaPredicted RBP21.05■□□□□ 0.96
VSX1-206ENST00000444511 CARS2Q9HA77 564 aaKnown RBP21.05■□□□□ 0.96
VSX1-206ENST00000444511 RCOR3Q9P2K3 495 aaPredicted RBP21.05■□□□□ 0.96
VSX1-206ENST00000444511 APPL1Q9UKG1 709 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 CAPN11Q9UMQ6 739 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 LRP4O75096 1905 aa21.05■□□□□ 0.96
VSX1-206ENST00000444511 RP1P56715 2156 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 ANKRD36A6QL64 1941 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 GOLGA6CA6NDK9 693 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 GOLGA6BA6NDN3 693 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 GOLGA6L19H0YKK7 550 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 NOBOXO60393 691 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 PGLSO95336 258 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 GOLGA6DP0CG33 693 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 ETV3P41162 512 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 SKOR1P84550 965 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 CCDC122Q5T0U0 273 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 CERCAMQ5T4B2 595 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 SPECC1LQ69YQ0 1117 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 ALKBH5Q6P6C2 394 aaKnown RBP21.04■□□□□ 0.96
VSX1-206ENST00000444511 RAB11FIP2Q7L804 512 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 HEATR4Q86WZ0 1026 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 LRRC49Q8IUZ0 686 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 FBXO39Q8N4B4 442 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 CCL4L1Q8NHW4 92 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 KIAA1524Q8TCG1 905 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 DTD2Q96FN9 168 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 SCRN2Q96FV2 425 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 NT5MQ9NPB1 228 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 GOLGA6AQ9NYA3 693 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 LRIT1Q9P2V4 623 aa21.04■□□□□ 0.96
VSX1-206ENST00000444511 LUC7L2Q9Y383 392 aaKnown RBP21.04■□□□□ 0.96
VSX1-206ENST00000444511 NPIPB15A6NHN6 443 aaPredicted RBP21.03■□□□□ 0.96
VSX1-206ENST00000444511 PSMD11O00231 422 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 KRT10P13645 584 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 PNLIPP16233 465 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 LHCGRP22888 699 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 RHDQ02161 417 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 ITKQ08881 620 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 VAC14Q08AM6 782 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 MMRN1Q13201 1228 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 RAET1GQ6H3X3 334 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 HSD11B1LQ7Z5J1 315 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 SFTPA2Q8IWL1 248 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 TEX101Q9BY14 249 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.03■□□□□ 0.96
VSX1-206ENST00000444511 RNF215Q9Y6U7 377 aa21.03■□□□□ 0.96
VSX1-206ENST00000444511 ERVH48-1M5A8F1 160 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 CD48P09326 243 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 CCNB1P14635 433 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 CTPS1P17812 591 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 IL4RP24394 825 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 CCKBRP32239 447 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 UGT1A5P35504 534 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 GJC1P36383 396 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 ILF3Q12906 894 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-206ENST00000444511 HLTFQ14527 1009 aaKnown RBP eCLIP21.02■□□□□ 0.96
VSX1-206ENST00000444511 TAF1BQ53T94 588 aaPredicted RBP21.02■□□□□ 0.96
VSX1-206ENST00000444511 Q6ZVL8 140 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 TSPAN33Q86UF1 283 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 NDUFAF2Q8N183 169 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 CBARPQ8N350 705 aaPredicted RBP21.02■□□□□ 0.96
VSX1-206ENST00000444511 ZNF564Q8TBZ8 553 aaPredicted RBP21.02■□□□□ 0.96
VSX1-206ENST00000444511 MCCC1Q96RQ3 725 aaPredicted RBP21.02■□□□□ 0.96
VSX1-206ENST00000444511 SEMA3CQ99985 751 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 GSDMCQ9BYG8 508 aa21.02■□□□□ 0.96
VSX1-206ENST00000444511 POLR1EQ9GZS1 481 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms