RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FEM1CQ96JP0 617 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 COPS8Q99627 209 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ADAMTS10Q9H324 1103 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 GABRDO14764 452 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PER2O15055 1255 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 GPR1P46091 355 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PNLIPRP1P54315 467 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 NME5P56597 212 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CTBP1Q13363 440 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ADCK1Q86TW2 530 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CFAP52Q8N1V2 620 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 SELENOMQ8WWX9 145 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 DLGAP2Q9P1A6 1054 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 APOA1P02647 267 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PABPC1P11940 636 aaKnown RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PPIBP23284 216 aaKnown RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PIK3R1P27986 724 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 FASTKD3Q14CZ7 662 aaKnown RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF618Q5T7W0 954 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ACDQ96AP0 544 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 TBC1D10AQ9BXI6 508 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 TBC1D23Q9NUY8 699 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 NINQ8N4C6 2090 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 AZIN1O14977 448 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CBX6O95503 412 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 SOX6P35712 828 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 MAXP61244 160 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 B3GNT9Q6UX72 402 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CDRT15Q96T59 188 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CCDC28BQ9BUN5 200 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 XPR1Q9UBH6 696 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 TRAF6Q9Y4K3 522 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 TEX264Q9Y6I9 313 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ZFP37Q9Y6Q3 630 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 INPP4BO15327 924 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PSMG1O95456 288 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 AAGABQ6PD74 315 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 KLHL28Q9NXS3 571 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 C15orf41Q9Y2V0 281 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 FAM58BPP0C7Q3 252 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 DIS3LQ8TF46 1054 aaKnown RBP11.55□□□□□ -0.56
PTCH1-208ENST00000430669 CFAP97Q9P2B7 532 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 PSME2Q9UL46 239 aa11.55□□□□□ -0.56
PTCH1-208ENST00000430669 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 POP4O95707 220 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 KRR1Q13601 381 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 FSTL4Q6MZW2 842 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SERPINA13PQ6UXR4 307 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 BANPQ8N9N5 519 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ITFG1Q8TB96 612 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 DACT3Q96B18 629 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ZDHHC4Q9NPG8 344 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ATXN3P54252 364 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 OASLQ15646 514 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 RAET1GQ6H3X3 334 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 TMEM26Q6ZUK4 368 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ZDHHC13Q8IUH4 622 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 NELL1Q92832 810 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 TMEM79Q9BSE2 394 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ENTPD4Q9Y227 616 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 GLYATL1P3A0A0U1RQE8 302 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 KRT87PA6NCN2 255 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 URADA6NGE7 173 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF682O95780 498 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 CLPTM1O96005 669 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 FGBP02675 491 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 PTGER3P43115 390 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 GPR158Q5T848 1215 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 NCBP2-AS2Q69YL0 99 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 UNC5BQ8IZJ1 945 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SEC14L1Q92503 715 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SEMA4BQ9NPR2 832 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 KRT75O95678 551 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 PRNPP04156 253 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 PRKG2Q13237 762 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 FBXW8Q8N3Y1 598 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 NDRG1Q92597 394 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SPATA5L1Q9BVQ7 753 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ILVBLA1L0T0 632 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 AGPSO00116 658 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 LDLRAP1Q5SW96 308 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 CNTD1Q8N815 330 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 KCTD4Q8WVF5 259 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ITCHQ96J02 903 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 ELAC1Q9H777 363 aaKnown RBP11.54□□□□□ -0.56
PTCH1-208ENST00000430669 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
PTCH1-208ENST00000430669 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms