RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TDRD1Q9BXT4 1180 aaKnown RBP11.22□□□□□ -0.61
RFFL-204ENST00000414419 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 ASXL3Q9C0F0 2248 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 ABCG4Q9H172 646 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 TCEAL2Q9H3H9 227 aaPredicted RBP11.22□□□□□ -0.61
RFFL-204ENST00000414419 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 CAAP1Q9H8G2 361 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 PCDH9Q9HC56 1237 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 MOSPD1Q9UJG1 213 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 SALL4Q9UJQ4 1053 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 RPL26L1Q9UNX3 145 aaKnown RBP11.22□□□□□ -0.61
RFFL-204ENST00000414419 PPIL1Q9Y3C6 166 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
RFFL-204ENST00000414419 CACNA1BQ00975 2339 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 RP1P56715 2156 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 ARHGEF17Q96PE2 2063 aaPredicted RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 FAM149AA5PLN7 773 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 FZD6O60353 706 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 TRBC1P01850 177 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 HOXC4P09017 264 aaPredicted RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 GIMD1P0DJR0 217 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 CKMT1AP12532 417 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 TSHRP16473 764 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 CDC25BP30305 580 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 ETV3P41162 512 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 CETN2P41208 172 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 VAV2P52735 878 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 KIAA1024LP59773 190 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 NIPAL4Q0D2K0 466 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 ZBTB17Q13105 803 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 ALG11Q2TAA5 492 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 LRRC66Q68CR7 880 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 RAET1GQ6H3X3 334 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 RAD9BQ6WBX8 426 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 Q6ZVL8 140 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 HSD11B1LQ7Z5J1 315 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 TSPAN33Q86UF1 283 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 SDR16C5Q8N3Y7 309 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 OR56A4Q8NGH8 313 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 EXD1Q8NHP7 514 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 KIAA1524Q8TCG1 905 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 TFB1MQ8WVM0 346 aaKnown RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 ZCCHC14Q8WYQ9 949 aaKnown RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 FUBP1Q96AE4 644 aaKnown RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 DTD2Q96FN9 168 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 MCCC1Q96RQ3 725 aaPredicted RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 LRRC61Q9BV99 259 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 CEP41Q9BYV8 373 aa11.21□□□□□ -0.61
RFFL-204ENST00000414419 PHPT1Q9NRX4 125 aaPredicted RBP11.21□□□□□ -0.61
RFFL-204ENST00000414419 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.62
RFFL-204ENST00000414419 SPEGQ15772 3267 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 hCG_1818297A0A087WSY0 165 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CPED1A4D0V7 1026 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CAPN8A6NHC0 703 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 BTNL10A8MVZ5 291 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TNFRSF10CO14798 259 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 MTSS1O43312 755 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 GCATO75600 419 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 GP1BAP07359 652 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 MYCLP1P12525 358 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 GM2AP17900 193 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 LHCGRP22888 699 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TRIM23P36406 574 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TNNT3P45378 269 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 GPR1P46091 355 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 NR0B2Q15466 257 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TCEA2Q15560 299 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TAZQ16635 292 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CDKN3Q16667 212 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 HES3Q5TGS1 186 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CRTC1Q6UUV9 634 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 B4GALNT4Q76KP1 1039 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 ZC3H18Q86VM9 953 aaKnown RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 CNTD1Q8N815 330 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 AP2M1Q96CW1 435 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 RBM15Q96T37 977 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFFL-204ENST00000414419 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 MLPHQ9BV36 600 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 CCDC86Q9H6F5 360 aaKnown RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 SAE1Q9UBE0 346 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 CD84Q9UIB8 345 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 PNMA8BQ9ULN7 279 aaPredicted RBP11.2□□□□□ -0.62
RFFL-204ENST00000414419 DGKBQ9Y6T7 804 aa11.2□□□□□ -0.62
RFFL-204ENST00000414419 DUSP10Q9Y6W6 482 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms