RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SH3RF2Q8TEC5 729 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SUSD6Q92537 303 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 FCRL3Q96P31 734 aaPredicted RBP14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 V9GYQ6 96 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ARFGEF1Q9Y6D6 1849 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 H3BMM5 538 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ENTPD5O75356 428 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 VHLP40337 213 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SERINC3Q13530 473 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 INPP5AQ14642 412 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 CRY1Q16526 586 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SERPINA13PQ6UXR4 307 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ZC3HC1Q86WB0 502 aaKnown RBP14.05□□□□□ -0.16
SCAF4-202ENST00000399804 GALNT4Q8N4A0 578 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF778Q96MU6 729 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 COPS8Q99627 209 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF840PA6NDX5 716 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 NEMP2A6NFY4 417 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SLC2A4P14672 509 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ATP6V0D1P61421 351 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 CNTD1Q8N815 330 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 MCOLN3Q8TDD5 553 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF599Q96NL3 588 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 THUMPD3Q9BV44 507 aaKnown RBP14.05□□□□□ -0.16
SCAF4-202ENST00000399804 VCX3AQ9NNX9 186 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 ABCB8Q9NUT2 735 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 TBC1D14Q9P2M4 693 aa14.05□□□□□ -0.16
SCAF4-202ENST00000399804 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 SRCAPQ6ZRS2 3230 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PSMD12O00232 456 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 GRM6O15303 877 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 INPPL1O15357 1258 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PEX11AO75192 247 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 RFPL1O75677 317 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 RING1Q06587 406 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 NFYCQ13952 458 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CDHR3Q6ZTQ4 885 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF781Q8N8C0 355 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CACYBPQ9HB71 228 aaKnown RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 OPTCQ9UBM4 332 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 GNPTGQ9UJJ9 305 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 FYNP06241 537 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PAX7P23759 505 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CALRP27797 417 aaKnown RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PKNOX1P55347 436 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 AP1S1P61966 158 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 MGAT3Q09327 533 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 ATP6AP1LQ52LC2 224 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 SETMARQ53H47 684 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CACHD1Q5VU97 1274 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 RTN4RL1Q86UN2 441 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 RBFAQ8N0V3 343 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 KIFC1Q9BW19 673 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 MOCS1Q9NZB8 636 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 MTRRQ9UBK8 725 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 STK39Q9UEW8 545 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 POLD2P49005 469 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 ZYG11AQ6WRX3 759 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 TAS1R1Q7RTX1 841 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 TRMT11Q7Z4G4 463 aaKnown RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF598Q86UK7 904 aaKnown RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 PCDH20Q8N6Y1 951 aaKnown RBP14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CDYL2Q8N8U2 506 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 AGAP11Q8TF27 550 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 CDKN2AIPNLQ96HQ2 116 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 BTRCQ9Y297 605 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 TRAF6Q9Y4K3 522 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 USP3Q9Y6I4 520 aa14.04□□□□□ -0.16
SCAF4-202ENST00000399804 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
SCAF4-202ENST00000399804 MRASO14807 208 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 PRAMEF11O60813 436 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 IL1BP01584 269 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 FPGSQ05932 587 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 BEND5Q7L4P6 421 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 CUZD1Q86UP6 607 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 RAB42Q8N4Z0 105 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 STN1Q9H668 368 aaKnown RBP14.03□□□□□ -0.16
SCAF4-202ENST00000399804 ORC6Q9Y5N6 252 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 TNS1Q9HBL0 1735 aaKnown RBP14.03□□□□□ -0.16
SCAF4-202ENST00000399804 TMEM189-UBE2V1I3L0A0 370 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 PRAMEF1O95521 474 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 KRT6AP02538 564 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 KRT6BP04259 564 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 COX4I1P13073 169 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 EEF1DP29692 281 aaKnown RBP14.03□□□□□ -0.16
SCAF4-202ENST00000399804 KRT6CP48668 564 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
SCAF4-202ENST00000399804 STARD3Q14849 445 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 IL27RAQ6UWB1 636 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 CMTM8Q8IZV2 173 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
SCAF4-202ENST00000399804 TNPO3Q9Y5L0 923 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms