RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 PPM1LQ5SGD2 360 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 MFSD4BQ5TF39 518 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 SPPL2CQ8IUH8 684 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 REXO4Q9GZR2 422 aaKnown RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 LYNP07948 512 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 PEX2P28328 305 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 KRR1Q13601 381 aaKnown RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 PHKG1Q16816 387 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 DGUOKQ16854 277 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 BROXQ5VW32 411 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 ZNF549Q6P9A3 640 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 PROX1Q92786 737 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 PANX1Q96RD7 426 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDH23-205ENST00000398809 ZNF395Q9H8N7 513 aaPredicted RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 PRKAG3Q9UGI9 489 aa17.21■□□□□ 0.35
CDH23-205ENST00000398809 POLR3HQ9Y535 204 aaPredicted RBP17.21■□□□□ 0.35
CDH23-205ENST00000398809 FAM149AA5PLN7 773 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 TCEA3O75764 348 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 PABPC1P11940 636 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 CHRNA4P43681 627 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ENPEPQ07075 957 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ABRQ12979 859 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 IKBKEQ14164 716 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 TXNDC11Q6PKC3 985 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 PARP8Q8N3A8 854 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ADCY4Q8NFM4 1077 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 GMPPBQ9Y5P6 360 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ZNF536O15090 1300 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 CXorf49A8MYA2 514 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDH23-205ENST00000398809 SPANXN2Q5MJ10 180 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 SYPL2Q5VXT5 272 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 VN1R5Q7Z5H4 357 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 RALGPS2Q86X27 583 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 NIPA2Q8N8Q9 360 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 OR7A2PQ8NGA2 310 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 GPR21Q99679 349 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 CORO1BQ9BR76 489 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 TCAF1Q9Y4C2 921 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 NPEPPSL1A6NEC2 478 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 LGR5O75473 907 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 ZNF37AP17032 561 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 CCNCP24863 283 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 IDH3AP50213 366 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 TRAF3Q13114 568 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 RSBN1Q5VWQ0 802 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 ZYG11AQ6WRX3 759 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ZNF558Q96NG5 402 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 ARMC7Q9H6L4 198 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 AP3M1Q9Y2T2 418 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 KPNA4O00629 521 aaPredicted RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 ADCY6O43306 1168 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 MAPK8P45983 427 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 OFCC1Q8IZS5 231 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 SPPL2BQ8TCT7 592 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 REPS1Q96D71 796 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 RNFT2Q96EX2 444 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 MRPS26Q9BYN8 205 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 PRRG3Q9BZD7 231 aa17.2■□□□□ 0.34
CDH23-205ENST00000398809 CLK4Q9HAZ1 481 aaKnown RBP17.2■□□□□ 0.34
CDH23-205ENST00000398809 ANKDD1BA6NHY2 528 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 RFXANKO14593 260 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 RPP40O75818 363 aaKnown RBP17.19■□□□□ 0.34
CDH23-205ENST00000398809 PIGRP01833 764 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 CYP2A13Q16696 494 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 USP41Q3LFD5 358 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 HMG20AQ9NP66 347 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 TBC1D30Q9Y2I9 924 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 PCDHGC4Q9Y5F7 938 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 FADS3Q9Y5Q0 445 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 MYH10P35580 1976 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 KAT6AQ92794 2004 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 NEMP2A6NFY4 417 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 NDST3O95803 873 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 VAV1P15498 845 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 RHOQP17081 205 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 SGCGQ13326 291 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 BLMHQ13867 455 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 TCEA2Q15560 299 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 DPYSL2Q16555 572 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 XKR6Q5GH73 641 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 C6orf52Q5T4I8 152 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 ZNF618Q5T7W0 954 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 LINGO4Q6UY18 593 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 PGAM4Q8N0Y7 254 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 OR2T12Q8NG77 320 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 ESAMQ96AP7 390 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 REXO5Q96IC2 774 aaKnown RBP17.19■□□□□ 0.34
CDH23-205ENST00000398809 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 TSPAN18Q96SJ8 248 aa17.19■□□□□ 0.34
CDH23-205ENST00000398809 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms