RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PCDHA3Q9Y5H8 950 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 AUP1Q9Y679 476 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 FKBP7Q9Y680 259 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 SNCAIPQ9Y6H5 919 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 AP1M2Q9Y6Q5 423 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 MAU2Q9Y6X3 613 aa3.62□□□□□ -1.83
XRCC4-203ENST00000396027 ADCY10Q96PN6 1610 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ABCA8O94911 1581 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TTC37Q6PGP7 1564 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SAMD9LQ8IVG5 1584 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NFAT5O94916 1531 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ZNF609O15014 1411 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MST1RQ04912 1400 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CLUHO75153 1309 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ADGRA2Q96PE1 1338 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ESYT3A0FGR9 886 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ARHGAP42A6NI28 874 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 FAM155AB1AL88 458 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 KCNK1O00180 336 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PSMD12O00232 456 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TRIM38O00635 465 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 KLF11O14901 512 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PCDH17O14917 1159 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PLD2O14939 933 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SCAMP1O15126 338 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TO15178 435 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ADAM12O43184 909 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TREHO43280 583 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RIPK2O43353 540 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SMAD6O43541 496 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PLOD3O60568 738 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PLA2G6O60733 806 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MRPS14O60783 128 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LRRN2O75325 713 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CILPO75339 1184 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PMPCBO75439 489 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CDC123O75794 336 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CIAO1O76071 339 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RPP14O95059 124 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 HTR3BO95264 441 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 GCNT3O95395 438 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 NDST3O95803 873 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TSPAN12O95859 305 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TTLL1O95922 423 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TNNC2P02585 160 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 UGT2B4P06133 528 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CDK1P06493 297 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PFKMP08237 780 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SMIM18P0DKX4 95 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DBTP11182 482 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 C6P13671 934 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PRG2P13727 222 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 LCP1P13796 627 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ANXA8P13928 327 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CYP11B1P15538 503 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RAG1P15918 1043 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PFKFB1P16118 471 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DPEP1P16444 411 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TMEM11P17152 192 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 GM2AP17900 193 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PI3P19957 117 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ITGALP20701 1170 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PROZP22891 400 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PMLP29590 882 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EEF1DP29692 281 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 POLR2BP30876 1174 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CHRNA3P32297 505 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ARL1P40616 181 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EIF2S3P41091 472 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SLC1A4P43007 532 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 BRCC3P46736 316 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TPMTP51580 245 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 PEX3P56589 373 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SPCS3P61009 180 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MRPS9P82933 396 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ATP2C1P98194 919 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 C2orf54Q08AI8 447 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 HNRNPA0Q13151 305 aaKnown RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 FADDQ13158 208 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DMP1Q13316 513 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ITGADQ13349 1161 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SLC12A1Q13621 1099 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SCARB2Q14108 478 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 EFR3AQ14156 821 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DOC2AQ14183 400 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 MFSD13AQ14CX5 517 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RTP5Q14D33 572 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 TCEAL1Q15170 157 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RPS6KA1Q15418 735 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 UAP1Q16222 522 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DPYSL2Q16555 572 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 AANATQ16613 207 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DGUOKQ16854 277 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 RNF212Q495C1 297 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 GTDC1Q4AE62 458 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 DCAF6Q58WW2 860 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 ARSHQ5FYA8 562 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 SNAP47Q5SQN1 464 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 THEM4Q5T1C6 240 aa3.61□□□□□ -1.83
XRCC4-203ENST00000396027 CCNYL2Q5T2Q4 361 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms