RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CXCL9Q07325 125 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CYP24A1Q07973 514 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 STX5Q13190 355 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GALNT3Q14435 633 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 FAM45BPQ6NSW5 357 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GPC2Q8N158 579 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 JOSD2Q8TAC2 188 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 NPLOC4Q8TAT6 608 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 FAM45AQ8TCE6 357 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 FAR1Q8WVX9 515 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GTF2H4Q92759 462 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 TOE1Q96GM8 510 aaKnown RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 C8orf4Q9NR00 106 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CCDC167Q9P0B6 97 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 OSGIN1Q9UJX0 560 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SDHDO14521 159 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SLC16A4O15374 487 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CHRNA1P02708 482 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 KRT7P08729 469 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 RBP1P09455 135 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 IL10P22301 178 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 MLLT3P42568 568 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GRIA4P48058 902 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SERPINB10P48595 397 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CTU2Q2VPK5 515 aaKnown RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SLC39A4Q6P5W5 647 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 KCTD6Q8NC69 237 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 ISL2Q96A47 359 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 C17orf62Q9BQA9 187 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 LXNQ9BS40 222 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CHST12Q9NRB3 414 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CFL2Q9Y281 166 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 PCDHB3Q9Y5E6 796 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 LEUTXA8MZ59 168 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SLC9A3R1O14745 358 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 AGXTP21549 392 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 HOXA13P31271 388 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 WNT7BP56706 349 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 EMX1Q04741 257 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 MEP1AQ16819 746 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 GPATCH4Q5T3I0 446 aaKnown RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 NDUFAF5Q5TEU4 345 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SDE2Q6IQ49 451 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 AFAP1L2Q8N4X5 818 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CCDC185Q8N715 623 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 KDM1BQ8NB78 822 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 CHDHQ8NE62 594 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 AFG1LQ8WV93 481 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 HDAC2Q92769 488 aaKnown RBP9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 BCL7BQ9BQE9 202 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 ING2Q9H160 280 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 PCSK1NQ9UHG2 260 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 PCDHB4Q9Y5E5 795 aa9.57□□□□□ -0.88
SF3A3-201ENST00000373019 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ZNF99A8MXY4 864 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-201ENST00000373019 FAM25AB3EWG3 89 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 FAM25CB3EWG5 89 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 FAM25GB3EWG6 89 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 DNAJB5O75953 348 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 PGK2P07205 417 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 TCF3P15923 654 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 RPS12P25398 132 aaKnown RBP9.56□□□□□ -0.88
SF3A3-201ENST00000373019 PSMA4P25789 261 aaKnown RBP9.56□□□□□ -0.88
SF3A3-201ENST00000373019 GRK3P35626 688 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 PRELPP51888 382 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 SNAP25P60880 206 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 TFAMQ00059 246 aaKnown RBP9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 C6orf141Q5SZD1 244 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 GJC2Q5T442 439 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-201ENST00000373019 STRIP1Q5VSL9 837 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 THAP5Q7Z6K1 395 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 NXNL1Q96CM4 212 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 YIPF6Q96EC8 236 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ELMO2Q96JJ3 720 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 MCMBPQ9BTE3 642 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 CNTN6Q9UQ52 1028 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 IRS2Q9Y4H2 1338 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 AGAP5A6NIR3 686 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ZBBXA8MT70 800 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ATP6V1G2-DDX39BF2Z307 99 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 MAP3K6O95382 1288 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 CYP2A7P20853 494 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 PSMA2P25787 234 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 CD6P30203 668 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 SLC26A3P40879 764 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ATP5OP48047 213 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 INCA1Q0VD86 236 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 SEMA5AQ13591 1074 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 LCN8Q6JVE9 175 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 ERAP2Q6P179 960 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 PRSS48Q7RTY5 328 aa9.56□□□□□ -0.88
SF3A3-201ENST00000373019 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms