RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CCDC50Q8IVM0 306 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 FSTL5Q8N475 847 aaPredicted RBP27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 ACRBPQ8NEB7 543 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 TSACCQ96A04 125 aaPredicted RBP27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 FUBP1Q96AE4 644 aaKnown RBP27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 DTD2Q96FN9 168 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 WDR26Q9H7D7 661 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 PCDH9Q9HC56 1237 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 NCKIPSDQ9NZQ3 722 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 DUSP10Q9Y6W6 482 aa27.64■■■□□ 2.02
ATPAF1-201ENST00000329231 SPEGQ15772 3267 aa27.64■■■□□ 2.01
ATPAF1-201ENST00000329231 LMO7DNF2Z398 122 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 GCATO75600 419 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 ANXA6P08133 673 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 CTSEP14091 401 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 ZNF30P17039 623 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 ETV3P41162 512 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 CD86P42081 329 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 MARCKSL1P49006 195 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 E2F1Q01094 437 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 C1orf61Q13536 156 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 LLGL1Q15334 1064 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 ELOCQ15369 112 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 DEFB133Q30KQ1 61 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 KIAA1328Q86T90 577 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 TMEM139Q8IV31 216 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 TXLNBQ8N3L3 684 aa27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 KDF1Q8NAX2 398 aaPredicted RBP27.63■■■□□ 2.01
ATPAF1-201ENST00000329231 hCG_1818297A0A087WSY0 165 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 PDE2AO00408 941 aaPredicted RBP27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 PJA2O43164 708 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 PRLP01236 227 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 MMP2P08253 660 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 TSHRP16473 764 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 GSDMDP57764 484 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 PTPRRQ15256 657 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 LRRC66Q68CR7 880 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 CRTC1Q6UUV9 634 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 Q6ZVL8 140 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 RD3Q7Z3Z2 195 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 LPCAT1Q8NF37 534 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 OR56A4Q8NGH8 313 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 TFB1MQ8WVM0 346 aaKnown RBP27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 KRT35Q92764 455 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 P3H4Q92791 437 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 AGAP3Q96P47 875 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 CEP41Q9BYV8 373 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 LACRTQ9GZZ8 138 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 SAE1Q9UBE0 346 aaPredicted RBP27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 DGKBQ9Y6T7 804 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 PTPRBP23467 1997 aa27.62■■■□□ 2.01
ATPAF1-201ENST00000329231 CAPN8A6NHC0 703 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 TNFRSF10CO14798 259 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 TNFP01375 233 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 CTNNA1P35221 906 aaKnown RBP27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 SKOR1P84550 965 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 PRKD1Q15139 912 aaPredicted RBP27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 PPP2R5EQ16537 467 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 NT5DC3Q86UY8 548 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 SDR16C5Q8N3Y7 309 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 KIAA1524Q8TCG1 905 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 GLMNQ92990 594 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 ADGRE3Q9BY15 652 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 CLPBQ9H078 707 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 PHPT1Q9NRX4 125 aaPredicted RBP27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 DOLKQ9UPQ8 538 aa27.61■■■□□ 2.01
ATPAF1-201ENST00000329231 FAM149AA5PLN7 773 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 JUPP14923 745 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 PECAM1P16284 738 aaPredicted RBP27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 COPS2P61201 443 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 TEX44Q53QW1 395 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 HES3Q5TGS1 186 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 B4GALNT4Q76KP1 1039 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 TECPR1Q7Z6L1 1165 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 PELI3Q8N2H9 469 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 SCG3Q8WXD2 468 aaKnown RBP27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 IMP4Q96G21 291 aaKnown RBP27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 SMIM14Q96QK8 99 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 SLC25A51Q9H1U9 297 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 PCDHA3Q9Y5H8 950 aa27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 MAP1BP46821 2468 aaKnown RBP27.6■■■□□ 2.01
ATPAF1-201ENST00000329231 LY6G6EA0A0G2JKS1 128 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 GOLGA6CA6NDK9 693 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 GOLGA6BA6NDN3 693 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 TMEM202A6NGA9 273 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 YY2O15391 372 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 MTSS1O43312 755 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 GP1BAP07359 652 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 GOLGA6DP0CG33 693 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 MYCLP1P12525 358 aaPredicted RBP27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 TEAD1P28347 426 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 PTSQ03393 145 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 DPTQ07507 201 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 ADCY2Q08462 1091 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 C6orf132Q5T0Z8 1188 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 LVRNQ6Q4G3 990 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 PDXPQ96GD0 296 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 LYSMD1Q96S90 227 aa27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 RBM15Q96T37 977 aaKnown RBP eCLIP27.59■■■□□ 2.01
ATPAF1-201ENST00000329231 BOCQ9BWV1 1114 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms