RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PHF10Q8WUB8 498 aaKnown RBP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 LPGAT1Q92604 370 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 OR52E6Q96RD3 313 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ZCCHC2Q9C0B9 1178 aaKnown RBP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 SF3B1O75533 1304 aaKnown RBP eCLIP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 KCNU1A8MYU2 1149 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 H3BMM5 538 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 PTGS2P35354 604 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 GUCA1AP43080 201 aaPredicted RBP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 PTGIRP43119 386 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 AFTPHQ6ULP2 937 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 NKD2Q969F2 451 aaPredicted RBP16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 CCNB1IP1Q9NPC3 277 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 KIF20BQ96Q89 1820 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 UMPSP11172 480 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 SERPINA4P29622 427 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 SEPHS1P49903 392 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 MED22Q15528 200 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ZNF544Q6NX49 715 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ELMO1Q92556 727 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ADAM2Q99965 735 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 ZYG11BQ9C0D3 744 aa16.48■□□□□ 0.23
SH3RF1-201ENST00000284637 FOXN2P32314 431 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 JAM2P57087 298 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CCNIQ14094 377 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 PYDC2Q56P42 97 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 PLD5Q8N7P1 536 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 LEMD2Q8NC56 503 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 USP7Q93009 1102 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 KLHL5Q96PQ7 755 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 MRPL45Q9BRJ2 306 aaKnown RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 UXTQ9UBK9 157 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 AGLP35573 1532 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 G3V2T6 193 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 TFECO14948 347 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 DGKZQ13574 1117 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CYP2A13Q16696 494 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 RALGPS1Q5JS13 557 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 RNASEH2BQ5TBB1 312 aaKnown RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 POTEHQ6S545 545 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 MON1BQ7L1V2 547 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 TDRPQ86YL5 185 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 MYLPFQ96A32 169 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CSPG4P5Q96PW8 444 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 LRRIQ1Q96JM4 1722 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 OTCP00480 354 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CD48P09326 243 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 FGRP09769 529 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ATP5C1P36542 298 aaKnown RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 MTA1Q13330 715 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CNSTQ6PJW8 725 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 RAB43Q86YS6 212 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 LRRC17Q8N6Y2 441 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 C18orf25Q96B23 403 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 MAGEB10Q96LZ2 347 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 PPM1MQ96MI6 270 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 STARD7Q9NQZ5 370 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 SLC7A8Q9UHI5 535 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 POMPQ9Y244 141 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 POLR3HQ9Y535 204 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 DGKBQ9Y6T7 804 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CCDC189A1A4V9 331 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ANKDD1BA6NHY2 528 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ABATP80404 500 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ARL13AQ5H913 290 aaPredicted RBP16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 TBC1D21Q8IYX1 336 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 OR2T12Q8NG77 320 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 HM13Q8TCT9 377 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 RAB2BQ8WUD1 216 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 LINGO1Q96FE5 620 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 YME1L1Q96TA2 773 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ZDHHC6Q9H6R6 413 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 CHRAC1Q9NRG0 131 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 RFXANKO14593 260 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 PTPN3P26045 913 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 TMEM53Q6P2H8 277 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 ZNF438Q7Z4V0 828 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 NXNL1Q96CM4 212 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 SLC47A1Q96FL8 570 aa16.47■□□□□ 0.23
SH3RF1-201ENST00000284637 C9JVG2 144 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 PRLP01236 227 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 TNNI3P19429 210 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 NR4A1P22736 598 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 PLD1Q13393 1074 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 SDHAF4Q5VUM1 108 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 CDCA2Q69YH5 1023 aaPredicted RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 RALGPS2Q86X27 583 aaPredicted RBP16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 XYLT1Q86Y38 959 aa16.46■□□□□ 0.23
SH3RF1-201ENST00000284637 DEPDC4Q8N2C3 294 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms